Information for 5-AACTATCCAGGGTGCA (Motif 12)

C G T A C T G A A G T C A G C T G C T A A C G T A G T C A G T C C G T A A C T G C T A G C T A G A C G T A C T G A G T C C G T A
Reverse Opposite:
C G A T A C T G G T A C C G T A A G T C A G T C A G T C A C G T A C T G A C T G C G T A C G A T C T G A A C T G A G C T A C G T
p-value:1e-10
log p-value:-2.502e+01
Information Content per bp:1.912
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.6 +/- 21.8bp
Average Position of motif in Background47.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AACTATCCAGGGTGCA--
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T C G T A C T G A A G T C A G C T G C T A A C G T A G T C A G T C C G T A A C T G C T A G C T A G A C G T A C T G A G T C C G T A A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AACTATCCAGGGTGCA---
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T C G T A C T G A A G T C A G C T G C T A A C G T A G T C A G T C C G T A A C T G C T A G C T A G A C G T A C T G A G T C C G T A A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

ZNF143/MA0088.2/Jaspar

Match Rank:3
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AACTATCCAGGGTGCA---
---TACCCACAATGCATTG
 C G T A C T G A A G T C A G C T G C T A A C G T A G T C A G T C C G T A A C T G C T A G C T A G A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AACTATCCAGGGTGCA
-ATTTCCCAGVAKSCY
 C G T A C T G A A G T C A G C T G C T A A C G T A G T C A G T C C G T A A C T G C T A G C T A G A C G T A C T G A G T C C G T A
A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:5
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:AACTATCCAGGGTGCA
-RCATTCCWGG-----
 C G T A C T G A A G T C A G C T G C T A A C G T A G T C A G T C C G T A A C T G C T A G C T A G A C G T A C T G A G T C C G T A
A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:6
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:AACTATCCAGGGTGCA
NGCTTTCTAGGAAN--
 C G T A C T G A A G T C A G C T G C T A A C G T A G T C A G T C C G T A A C T G C T A G C T A G A C G T A C T G A G T C C G T A
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.48
Offset:4
Orientation:forward strand
Alignment:AACTATCCAGGGTGCA-----
----GGCGAGGGGTCAAGGGC
 C G T A C T G A A G T C A G C T G C T A A C G T A G T C A G T C C G T A A C T G C T A G C T A G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:8
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-AACTATCCAGGGTGCA
NNNCTTTCCAGGAAA--
 A C G T C G T A C T G A A G T C A G C T G C T A A C G T A G T C A G T C C G T A A C T G C T A G C T A G A C G T A C T G A G T C C G T A
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.47
Offset:0
Orientation:forward strand
Alignment:AACTATCCAGGGTGCA
CANAGNNCAAAGTCCA
 C G T A C T G A A G T C A G C T G C T A A C G T A G T C A G T C C G T A A C T G C T A G C T A G A C G T A C T G A G T C C G T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

PB0159.1_Rfx4_2/Jaspar

Match Rank:10
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-AACTATCCAGGGTGCA
NNNGTAACTANGNNA--
 A C G T C G T A C T G A A G T C A G C T G C T A A C G T A G T C A G T C C G T A A C T G C T A G C T A G A C G T A C T G A G T C C G T A
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A A C G T A C G T