Information for 9-CGCCGCGGCGCGG (Motif 12)

A T G C A T C G A G T C A G T C A C T G A T G C A C T G A T C G A G T C A C T G A G T C A T C G A C T G
Reverse Opposite:
A G T C A T G C A C T G A G T C A C T G A T G C A G T C A T C G A G T C A C T G A C T G A T G C A T C G
p-value:1e-6
log p-value:-1.500e+01
Information Content per bp:1.903
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.0 +/- 30.9bp
Average Position of motif in Background64.3 +/- 7.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:CGCCGCGGCGCGG-
------GGCGCGCT
 A T G C A T C G A G T C A G T C A C T G A T G C A C T G A T C G A G T C A C T G A G T C A T C G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGCCGCGGCGCGG-
NNGCNCTGCGCGGC
 A T G C A T C G A G T C A G T C A C T G A T G C A C T G A T C G A G T C A C T G A G T C A T C G A C T G A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGCCGCGGCGCGG
CAGGCCNNGGCCNN-
 A C G T A C G T A T G C A T C G A G T C A G T C A C T G A T G C A C T G A T C G A G T C A C T G A G T C A T C G A C T G
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CGCCGCGGCGCGG
GACCCCCCGCTGCGC--
 A C G T A C G T A C G T A C G T A T G C A T C G A G T C A G T C A C T G A T G C A C T G A T C G A G T C A C T G A G T C A T C G A C T G
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CGCCGCGGCGCGG--
---GGGGGCGGGGCC
 A T G C A T C G A G T C A G T C A C T G A T G C A C T G A T C G A G T C A C T G A G T C A T C G A C T G A C G T A C G T
A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGCCGCGGCGCGG----
NNNNTTGGCGCCGANNN
 A T G C A T C G A G T C A G T C A C T G A T G C A C T G A T C G A G T C A C T G A G T C A T C G A C T G A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGCCGCGGCGCGG----
NAGANTGGCGGGGNGNA
 A T G C A T C G A G T C A G T C A C T G A T G C A C T G A T C G A G T C A C T G A G T C A T C G A C T G A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CGCCGCGGCGCGG
CGCAGCTGCG---
 A T G C A T C G A G T C A G T C A C T G A T G C A C T G A T C G A G T C A C T G A G T C A T C G A C T G
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CGCCGCGGCGCGG
GACCCCCCGCTGTGC--
 A C G T A C G T A C G T A C G T A T G C A T C G A G T C A G T C A C T G A T G C A C T G A T C G A G T C A C T G A G T C A T C G A C T G
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CGCCGCGGCGCGG-
GGCGGGGGCGGGGG
 A T G C A T C G A G T C A G T C A C T G A T G C A C T G A T C G A G T C A C T G A G T C A T C G A C T G A C G T
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G