Information for 9-TGGCCACAGGGGG (Motif 5)

G A C T A C T G A C T G G A T C A G T C T C G A A G T C C G T A T A C G C T A G A C T G C A T G C T A G
Reverse Opposite:
A G T C G A T C A G T C A G T C A T G C C G A T A C T G A C G T A C T G C T A G A G T C G T A C C T G A
p-value:1e-13
log p-value:-3.167e+01
Information Content per bp:1.794
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif29.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets58.5 +/- 22.2bp
Average Position of motif in Background53.6 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)3.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TGGCCACAGGGGG
-GTCCCCAGGGGA
 G A C T A C T G A C T G G A T C A G T C T C G A A G T C C G T A T A C G C T A G A C T G C A T G C T A G
A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

PLAG1/MA0163.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGGCCACAGGGGG
GGGGCCCAAGGGGG
 A C G T G A C T A C T G A C T G G A T C A G T C T C G A A G T C C G T A T A C G C T A G A C T G C A T G C T A G
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCACAGGGGG
WTGSCCTSAGGS--
 A C G T G A C T A C T G A C T G G A T C A G T C T C G A A G T C C G T A T A C G C T A G A C T G C A T G C T A G
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGGCCACAGGGGG--
-CACCCCCGGGGGGG
 G A C T A C T G A C T G G A T C A G T C T C G A A G T C C G T A T A C G C T A G A C T G C A T G C T A G A C G T A C G T
A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCACAGGGGG-
NTNGCCTCAGGCNNN
 A C G T G A C T A C T G A C T G G A T C A G T C T C G A A G T C C G T A T A C G C T A G A C T G C A T G C T A G A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGGCCACAGGGGG
-TGCCCNGGGGCA
 G A C T A C T G A C T G G A T C A G T C T C G A A G T C C G T A T A C G C T A G A C T G C A T G C T A G
A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGGCCACAGGGGG------
TGGCCACCAGGGGGCGCTA
 G A C T A C T G A C T G G A T C A G T C T C G A A G T C C G T A T A C G C T A G A C T G C A T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCACAGGGGG-
NTCGCCTCAGGCAAT
 A C G T G A C T A C T G A C T G G A T C A G T C T C G A A G T C C G T A T A C G C T A G A C T G C A T G C T A G A C G T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGGCCACAGGGGG
ATGCCCTGAGGC--
 A C G T G A C T A C T G A C T G G A T C A G T C T C G A A G T C C G T A T A C G C T A G A C T G C A T G C T A G
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGGCCACAGGGGG-------
TGGCCACCAGGTGGCACTNT
 G A C T A C T G A C T G G A T C A G T C T C G A A G T C C G T A T A C G C T A G A C T G C A T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T