Information for 9-CCCCTAGCTG (Motif 17)

A G T C G T A C A G T C G T A C C A G T C G T A C A T G G T A C A G C T T A C G
Reverse Opposite:
A T G C C T G A C A T G G T A C G C A T G T C A C A T G C T A G C A T G T C A G
p-value:1e-4
log p-value:-1.047e+01
Information Content per bp:1.682
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif5.76%
Number of Background Sequences with motif1459.5
Percentage of Background Sequences with motif3.06%
Average Position of motif in Targets47.5 +/- 26.5bp
Average Position of motif in Background50.0 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CCCCTAGCTG---
---CCAGCTGTTN
 A G T C G T A C A G T C G T A C C A G T C G T A C A T G G T A C A G C T T A C G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

ZIC1/MA0696.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCCCTAGCTG--
GACCCCCCGCTGTG
 A C G T A C G T A G T C G T A C A G T C G T A C C A G T C G T A C A T G G T A C A G C T T A C G A C G T A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

PB0128.1_Gcm1_2/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CCCCTAGCTG--
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G T C G T A C C A G T C G T A C A T G G T A C A G C T T A C G A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCCCTAGCTG---
---HCAGCTGDTN
 A G T C G T A C A G T C G T A C C A G T C G T A C A T G G T A C A G C T T A C G A C G T A C G T A C G T
A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCCCTAGCTG--
CCCCCTGCTGTG
 A G T C G T A C A G T C G T A C C A G T C G T A C A T G G T A C A G C T T A C G A C G T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCCTAGCTG---
GGCCYCCTGCTGDGH
 A C G T A C G T A G T C G T A C A G T C G T A C C A G T C G T A C A T G G T A C A G C T T A C G A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZIC3/MA0697.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCCTAGCTG---
GACCCCCCGCTGCGC
 A C G T A C G T A G T C G T A C A G T C G T A C C A G T C G T A C A T G G T A C A G C T T A C G A C G T A C G T A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTAGCTG
TTCCCCCTAC---
 A C G T A C G T A C G T A G T C G T A C A G T C G T A C C A G T C G T A C A T G G T A C A G C T T A C G
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCCCTAGCTG--
-NNGCAGCTGTC
 A G T C G T A C A G T C G T A C C A G T C G T A C A T G G T A C A G C T T A C G A C G T A C G T
A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CCCCTAGCTG
-----NGCTN
 A G T C G T A C A G T C G T A C C A G T C G T A C A T G G T A C A G C T T A C G
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G