Information for 14-TAACACAAAG (Motif 19)

A C G T C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T C G T A
p-value:1e-5
log p-value:-1.352e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.0 +/- 28.5bp
Average Position of motif in Background71.0 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:TAACACAAAG-
-AAAACAAAGG
 A C G T C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:TAACACAAAG
----ACAAAG
 A C G T C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C T G
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TAACACAAAG----
AAACAGACAAAGGAAT
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TAACACAAAG----
CTCACACAATGGCGC
 A C G T A C G T C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TAACACAAAG-
-VRRACAAWGG
 A C G T C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TAACACAAAG-
-AAAACAATGG
 A C G T C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T
A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:TAACACAAAG------
----ACAAAGGNBCCT
 A C G T C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TAACACAAAG-----
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TAACACAAAG-----
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TAACACAAAG-
---RACAAWGG
 A C G T C G T A C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G