Information for 13-TGCAATGCACAAA (Motif 11)

A C G T A C T G A G T C C G T A T C G A A C G T C T A G A G T C C G T A A G T C C G T A C G T A G T C A
Reverse Opposite:
C A G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G C T A C G T A C T G A G T C C G T A
p-value:1e-7
log p-value:-1.651e+01
Information Content per bp:1.935
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.8 +/- 22.7bp
Average Position of motif in Background45.0 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGCAATGCACAAA
TCCAATCCACA--
 A C G T A C T G A G T C C G T A T C G A A C G T C T A G A G T C C G T A A G T C C G T A C G T A G T C A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TGCAATGCACAAA
-SSAATCCACANN
 A C G T A C T G A G T C C G T A T C G A A C G T C T A G A G T C C G T A A G T C C G T A C G T A G T C A
A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

CEBPA/MA0102.3/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TGCAATGCACAAA-
---ATTGCACAATA
 A C G T A C T G A G T C C G T A T C G A A C G T C T A G A G T C C G T A A G T C C G T A C G T A G T C A A C G T
A C G T A C G T A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGCAATGCACAAA
NNNANTGCAGTGCNNTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A T C G A A C G T C T A G A G T C C G T A A G T C C G T A C G T A G T C A
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGCAATGCACAAA
AGATGCAATCCC----
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A T C G A A C G T C T A G A G T C C G T A A G T C C G T A C G T A G T C A
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGCAATGCACAAA-----
--CGAAGCACACAAAATA
 A C G T A C T G A G T C C G T A T C G A A C G T C T A G A G T C C G T A A G T C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGCAATGCACAAA---
-CAATTGCAAAAATAT
 A C G T A C T G A G T C C G T A T C G A A C G T C T A G A G T C C G T A A G T C C G T A C G T A G T C A A C G T A C G T A C G T
A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGCAATGCACAAA
---ATTGCGCAAC
 A C G T A C T G A G T C C G T A T C G A A C G T C T A G A G T C C G T A A G T C C G T A C G T A G T C A
A C G T A C G T A C G T T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGCAATGCACAAA---
GGGTGTGCCCAAAAGG
 A C G T A C T G A G T C C G T A T C G A A C G T C T A G A G T C C G T A A G T C C G T A C G T A G T C A A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGCAATGCACAAA---
CAGATGTGCACATACGT
 A C G T A C G T A C T G A G T C C G T A T C G A A C G T C T A G A G T C C G T A A G T C C G T A C G T A G T C A A C G T A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T