Information for 5-CCAGAGGGCGCTG (Motif 2)

A T G C G A T C T C G A A T C G T C G A T A C G T A C G A T C G T G A C T A C G G T A C C A G T T A C G
Reverse Opposite:
A T G C G T C A C A T G A T G C A C T G T A G C A T G C A T G C A G C T T A G C A G C T C T A G T A C G
p-value:1e-44
log p-value:-1.024e+02
Information Content per bp:1.634
Number of Target Sequences with motif82.0
Percentage of Target Sequences with motif9.70%
Number of Background Sequences with motif595.3
Percentage of Background Sequences with motif1.26%
Average Position of motif in Targets48.0 +/- 20.9bp
Average Position of motif in Background48.0 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CCAGAGGGCGCTG---
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A T G C G A T C T C G A A T C G T C G A T A C G T A C G A T C G T G A C T A C G G T A C C A G T T A C G A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CCAGAGGGCGCTG
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C T C G A A T C G T C G A T A C G T A C G A T C G T G A C T A C G G T A C C A G T T A C G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------CCAGAGGGCGCTG-
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C T C G A A T C G T C G A T A C G T A C G A T C G T G A C T A C G G T A C C A G T T A C G A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCAGAGGGCGCTG--
NNNAAGGGGGCGGGNNN
 A C G T A C G T A T G C G A T C T C G A A T C G T C G A T A C G T A C G A T C G T G A C T A C G G T A C C A G T T A C G A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCAGAGGGCGCTG-
--RGKGGGCGGAGC
 A T G C G A T C T C G A A T C G T C G A T A C G T A C G A T C G T G A C T A C G G T A C C A G T T A C G A C G T
A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

HINFP/MA0131.2/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCAGAGGGCGCTG
-NCGCGGACGTTG
 A T G C G A T C T C G A A T C G T C G A T A C G T A C G A T C G T G A C T A C G G T A C C A G T T A C G
A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

INSM1/MA0155.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCAGAGGGCGCTG
TGTCAGGGGGCG---
 A C G T A C G T A T G C G A T C T C G A A T C G T C G A T A C G T A C G A T C G T G A C T A C G G T A C C A G T T A C G
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCAGAGGGCGCTG
SCCTSAGGSCAW--
 A C G T A T G C G A T C T C G A A T C G T C G A T A C G T A C G A T C G T G A C T A C G G T A C C A G T T A C G
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCAGAGGGCGCTG
GCCTCAGGGCAT--
 A C G T A T G C G A T C T C G A A T C G T C G A T A C G T A C G A T C G T G A C T A C G G T A C C A G T T A C G
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCAGAGGGCGCTG-
--RGKGGGCGKGGC
 A T G C G A T C T C G A A T C G T C G A T A C G T A C G A T C G T G A C T A C G G T A C C A G T T A C G A C G T
A C G T A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C