Information for 12-YAGGCGCCTC (Motif 17)

A G T C G T C A A C T G A C T G A G T C A C T G A G T C A G T C A C G T A G T C
Reverse Opposite:
C T A G C G T A A C T G A C T G A G T C A C T G A G T C A G T C A C G T C T A G
p-value:1e-7
log p-value:-1.772e+01
Information Content per bp:1.901
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif60.1
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets54.4 +/- 26.4bp
Average Position of motif in Background49.3 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1/MA0024.3/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-YAGGCGCCTC-
TTTGGCGCCAAA
 A C G T A G T C G T C A A C T G A C T G A G T C A C T G A G T C A G T C A C G T A G T C A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---YAGGCGCCTC----
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A G T C G T C A A C T G A C T G A G T C A C T G A G T C A G T C A C G T A G T C A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----YAGGCGCCTC---
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A G T C G T C A A C T G A C T G A G T C A C T G A G T C A G T C A C G T A G T C A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:YAGGCGCCTC
--GGCGCGCT
 A G T C G T C A A C T G A C T G A G T C A C T G A G T C A G T C A C G T A G T C
A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PROX1/MA0794.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-YAGGCGCCTC-
CAAGACGCCTTA
 A C G T A G T C G T C A A C T G A C T G A G T C A C T G A G T C A G T C A C G T A G T C A C G T
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---YAGGCGCCTC---
TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T A G T C G T C A A C T G A C T G A G T C A C T G A G T C A G T C A C G T A G T C A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--YAGGCGCCTC---
NTCGCGCGCCTTNNN
 A C G T A C G T A G T C G T C A A C T G A C T G A G T C A C T G A G T C A G T C A C G T A G T C A C G T A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

NRF1/MA0506.1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----YAGGCGCCTC
TGCGCAGGCGC---
 A C G T A C G T A C G T A C G T A G T C G T C A A C T G A C T G A G T C A C T G A G T C A G T C A C G T A G T C
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--YAGGCGCCTC---
ANCGCGCGCCCTTNN
 A C G T A C G T A G T C G T C A A C T G A C T G A G T C A C T G A G T C A G T C A C G T A G T C A C G T A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--YAGGCGCCTC
GACAGGTGTN--
 A C G T A C G T A G T C G T C A A C T G A C T G A G T C A C T G A G T C A G T C A C G T A G T C
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T