Information for 5-GCTTTCCAGAATTCAA (Motif 6)

A C T G A G T C G A C T A G C T G A C T T A G C G T A C G C T A T C A G G C T A C T G A C A G T A C G T A G T C G T C A T C G A
Reverse Opposite:
A G C T C A G T T C A G T G C A G C T A G A C T C A G T A G T C C G A T C A T G A T C G C T G A T C G A C T G A T C A G G T A C
p-value:1e-10
log p-value:-2.503e+01
Information Content per bp:1.472
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.0 +/- 23.9bp
Average Position of motif in Background51.1 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BCL6B/MA0731.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCTTTCCAGAATTCAA
TGCTTTCTAGGAATTCA
 A C G T A C T G A G T C G A C T A G C T G A C T T A G C G T A C G C T A T C A G G C T A C T G A C A G T A C G T A G T C G T C A T C G A
A G C T C T A G A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C T G A C G T A A G C T A G C T T G A C T G C A

STAT3/MA0144.2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCTTTCCAGAATTCAA
-TTTCCCAGAAN----
 A C T G A G T C G A C T A G C T G A C T T A G C G T A C G C T A T C A G G C T A C T G A C A G T A C G T A G T C G T C A T C G A
A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTCCAGAATTCAA
NGCTTTCTAGGAAN---
 A C G T A C T G A G T C G A C T A G C T G A C T T A G C G T A C G C T A T C A G G C T A C T G A C A G T A C G T A G T C G T C A T C G A
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCTTTCCAGAATTCAA
ATTTCCAAGAA-----
 A C T G A G T C G A C T A G C T G A C T T A G C G T A C G C T A T C A G G C T A C T G A C A G T A C G T A G T C G T C A T C G A
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCTTTCCAGAATTCAA
---ATGCATAATTCA-
 A C T G A G T C G A C T A G C T G A C T T A G C G T A C G C T A T C A G G C T A C T G A C A G T A C G T A G T C G T C A T C G A
A C G T A C G T A C G T G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.56
Offset:7
Orientation:forward strand
Alignment:GCTTTCCAGAATTCAA
-------AAAAGTCAA
 A C T G A G T C G A C T A G C T G A C T T A G C G T A C G C T A T C A G G C T A C T G A C A G T A C G T A G T C G T C A T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCTTTCCAGAATTCAA
-TTTTCCA--------
 A C T G A G T C G A C T A G C T G A C T T A G C G T A C G C T A T C A G G C T A C T G A C A G T A C G T A G T C G T C A T C G A
A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCTTTCCAGAATTCAA
NNNCTTTCCAGGAAA---
 A C G T A C G T A C T G A G T C G A C T A G C T G A C T T A G C G T A C G C T A T C A G G C T A C T G A C A G T A C G T A G T C G T C A T C G A
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCTTTCCAGAATTCAA
--ATGCCAGACN----
 A C T G A G T C G A C T A G C T G A C T T A G C G T A C G C T A T C A G G C T A C T G A C A G T A C G T A G T C G T C A T C G A
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCTTTCCAGAATTCAA
TCTTTCGAGGAATTTG
 A C T G A G T C G A C T A G C T G A C T T A G C G T A C G C T A T C A G G C T A C T G A C A G T A C G T A G T C G T C A T C G A
C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G