Information for 11-TTCATTCTTACAA (Motif 9)

A G C T C A G T A G T C C G T A A C G T G A C T G T A C G A C T A G C T C G T A G T A C C G T A C G T A
Reverse Opposite:
G C A T A C G T A C T G G A C T C T G A C G T A A C T G C G T A C G T A C G A T C T A G G C T A C T G A
p-value:1e-13
log p-value:-3.109e+01
Information Content per bp:1.778
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif31.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets49.1 +/- 27.2bp
Average Position of motif in Background55.0 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TTCATTCTTACAA-
GACCACATTCATACAAT
 A C G T A C G T A C G T A G C T C A G T A G T C C G T A A C G T G A C T G T A C G A C T A G C T C G T A G T A C C G T A C G T A A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTCATTCTTACAA
NNCATTCATTCATNNN-
 A C G T A C G T A C G T A C G T A G C T C A G T A G T C C G T A A C G T G A C T G T A C G A C T A G C T C G T A G T A C C G T A C G T A
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTCATTCTTACAA--
---TTTCTNAGAAAN
 A G C T C A G T A G T C C G T A A C G T G A C T G T A C G A C T A G C T C G T A G T A C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

PB0096.1_Zfp187_1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTCATTCTTACAA--
-TTATTAGTACATAN
 A G C T C A G T A G T C C G T A A C G T G A C T G T A C G A C T A G C T C G T A G T A C C G T A C G T A A C G T A C G T
A C G T C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTCATTCTTACAA---
-ANATTTTTGCAANTN
 A G C T C A G T A G T C C G T A A C G T G A C T G T A C G A C T A G C T C G T A G T A C C G T A C G T A A C G T A C G T A C G T
A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTCATTCTTACAA
CTTTCANTATGACTV
 A C G T A C G T A G C T C A G T A G T C C G T A A C G T G A C T G T A C G A C T A G C T C G T A G T A C C G T A C G T A
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

PB0070.1_Sox30_1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTCATTCTTACAA
ANNTCCATTGTTCNNN
 A C G T A C G T A C G T A G C T C A G T A G T C C G T A A C G T G A C T G T A C G A C T A G C T C G T A G T A C C G T A C G T A
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

PB0178.1_Sox8_2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTCATTCTTACAA--
-ACATTCATGACACG
 A G C T C A G T A G T C C G T A A C G T G A C T G T A C G A C T A G C T C G T A G T A C C G T A C G T A A C G T A C G T
A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0067.1_Sox18_1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTCATTCTTACAA--
TTCAATTGTTCTAAAA
 A C G T A G C T C A G T A G T C C G T A A C G T G A C T G T A C G A C T A G C T C G T A G T A C C G T A C G T A A C G T A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TTCATTCTTACAA-
NAGTTTCABTHTGACTNW
 A C G T A C G T A C G T A C G T A G C T C A G T A G T C C G T A A C G T G A C T G T A C G A C T A G C T C G T A G T A C C G T A C G T A A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A