Information for 14-TVAKWWTYTA (Motif 17)

C G A T T A G C T C G A C A T G G C A T G C A T C A G T G A T C C G A T G C T A
Reverse Opposite:
C A G T G C T A C T A G G T C A C G T A C G T A G T A C A G C T A T C G G C T A
p-value:1e-7
log p-value:-1.706e+01
Information Content per bp:1.459
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.37%
Number of Background Sequences with motif469.2
Percentage of Background Sequences with motif0.99%
Average Position of motif in Targets45.8 +/- 24.9bp
Average Position of motif in Background48.5 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0119.1_Nkx6-1_2/Jaspar

Match Rank:1
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TVAKWWTYTA--
GANGTAATTAATTANN
 A C G T A C G T A C G T A C G T C G A T T A G C T C G A C A T G G C A T G C A T C A G T G A T C C G A T G C T A A C G T A C G T
T C A G C T G A T G C A T C A G G A C T T G C A C G T A C G A T G A C T C T G A G C T A C G A T C G A T C T G A A G T C A G C T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TVAKWWTYTA
AAGATATCCTT
 A C G T C G A T T A G C T C G A C A T G G C A T G C A T C A G T G A T C C G A T G C T A
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

PB0176.1_Sox5_2/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TVAKWWTYTA---
TATCATAATTAAGGA
 A C G T A C G T C G A T T A G C T C G A C A T G G C A T G C A T C A G T G A T C C G A T G C T A A C G T A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

PH0149.1_Pou3f4/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TVAKWWTYTA---
GANTTAATTAATTAANN
 A C G T A C G T A C G T A C G T C G A T T A G C T C G A C A T G G C A T G C A T C A G T G A T C C G A T G C T A A C G T A C G T A C G T
C T A G G C T A G T C A G A C T C G A T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A C G T A A C G T G A C T

PH0142.1_Pou1f1/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TVAKWWTYTA---
GANTTAATTAATTANNN
 A C G T A C G T A C G T A C G T C G A T T A G C T C G A C A T G G C A T G C A T C A G T G A T C C G A T G C T A A C G T A C G T A C G T
T A C G G C T A G A T C G C A T C G A T G T C A G C T A C G A T C G A T C G T A C G T A C G A T C A G T G T C A G C T A A G C T G A T C

PH0018.1_Dbx1/Jaspar

Match Rank:6
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------TVAKWWTYTA
TNATTATTAATTAATTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T T A G C T C G A C A T G G C A T G C A T C A G T G A T C C G A T G C T A
G A C T C G T A G C T A A G C T G A C T C G T A C G A T G C A T C G T A C G T A G C A T C G A T C G T A C G T A G A C T C G A T C T G A

PH0146.1_Pou3f1/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TVAKWWTYTA---
NANTTAATTAATTANNN
 A C G T A C G T A C G T A C G T C G A T T A G C T C G A C A T G G C A T G C A T C A G T G A T C C G A T G C T A A C G T A C G T A C G T
C A T G G C T A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T G A C T

PH0019.1_Dbx2/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TVAKWWTYTA--
NAATTAATTAATTNNN
 A C G T A C G T A C G T A C G T C G A T T A G C T C G A C A T G G C A T G C A T C A G T G A T C C G A T G C T A A C G T A C G T
C A T G C G T A T G C A G C A T G A C T G T C A G C T A G A C T G C A T C T G A C G T A G C A T C A G T C T G A G T C A T C G A

PH0147.1_Pou3f2/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TVAKWWTYTA--
NNNACTAATTAATTANC
 A C G T A C G T A C G T A C G T A C G T C G A T T A G C T C G A C A T G G C A T G C A T C A G T G A T C C G A T G C T A A C G T A C G T
G A T C C T G A G T C A T G C A G A T C C A G T G T C A C G T A C G A T C A G T C T G A C T G A C A G T G C A T G C T A G C A T A T G C

Lhx3/MA0135.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TVAKWWTYTA---
AAATTAATTAATC
 C G A T T A G C T C G A C A T G G C A T G C A T C A G T G A T C C G A T G C T A A C G T A C G T A C G T
C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C