Information for 11-RMYTGTGGGW (Motif 13)

T C G A T G C A G A C T C G A T T A C G C G A T C T A G C T A G A C T G C G T A
Reverse Opposite:
G C A T T G A C G A T C G A T C G C T A A T G C G C T A C T G A A C G T A G C T
p-value:1e-11
log p-value:-2.540e+01
Information Content per bp:1.463
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.77%
Number of Background Sequences with motif210.5
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets49.5 +/- 27.7bp
Average Position of motif in Background55.2 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:RMYTGTGGGW--
NNHTGTGGTTWN
 T C G A T G C A G A C T C G A T T A C G C G A T C T A G C T A G A C T G C G T A A C G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:RMYTGTGGGW-
GTCTGTGGTTT
 T C G A T G C A G A C T C G A T T A C G C G A T C T A G C T A G A C T G C G T A A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:RMYTGTGGGW--
--CTGTGGTTTN
 T C G A T G C A G A C T C G A T T A C G C G A T C T A G C T A G A C T G C G T A A C G T A C G T
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:RMYTGTGGGW-
-GCTGTGGTTT
 T C G A T G C A G A C T C G A T T A C G C G A T C T A G C T A G A C T G C G T A A C G T
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:RMYTGTGGGW-
-NNTGTGGTTT
 T C G A T G C A G A C T C G A T T A C G C G A T C T A G C T A G A C T G C G T A A C G T
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

ZNF143/MA0088.2/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----RMYTGTGGGW-
CAATGCATTGTGGGTA
 A C G T A C G T A C G T A C G T A C G T T C G A T G C A G A C T C G A T T A C G C G A T C T A G C T A G A C T G C G T A A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:RMYTGTGGGW
-ATTGTT---
 T C G A T G C A G A C T C G A T T A C G C G A T C T A G C T A G A C T G C G T A
A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----RMYTGTGGGW--
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A C G T A C G T T C G A T G C A G A C T C G A T T A C G C G A T C T A G C T A G A C T G C G T A A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-RMYTGTGGGW
CCATTGTTNY-
 A C G T T C G A T G C A G A C T C G A T T A C G C G A T C T A G C T A G A C T G C G T A
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--RMYTGTGGGW---
RGSMTBCTGGGAAAT
 A C G T A C G T T C G A T G C A G A C T C G A T T A C G C G A T C T A G C T A G A C T G C G T A A C G T A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T