Information for 10-CCCTAGGRAARAM (Motif 9)

A G T C A G T C A G T C A C G T C G T A A C T G A C T G C T A G C G T A C T G A C T A G G T C A G T C A
Reverse Opposite:
A C G T A C G T A G C T A G C T A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G C T A G
p-value:1e-10
log p-value:-2.437e+01
Information Content per bp:1.845
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.4 +/- 28.4bp
Average Position of motif in Background48.5 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CCCTAGGRAARAM
NGTCCCNNGGGA----
 A C G T A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G C T A G C G T A C T G A C T A G G T C A G T C A
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CCCTAGGRAARAM
ATTCCCAAGGGAAT--
 A C G T A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G C T A G C G T A C T G A C T A G G T C A G T C A
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CCCTAGGRAARAM
GTCCCCAGGGGA----
 A C G T A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G C T A G C G T A C T G A C T A G G T C A G T C A
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCCTAGGRAARAM
TTGCCCTAGGGCAT--
 A C G T A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G C T A G C G T A C T G A C T A G G T C A G T C A
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCCTAGGRAARAM
-CSTGGGAAAD--
 A G T C A G T C A G T C A C G T C G T A A C T G A C T G C T A G C G T A C T G A C T A G G T C A G T C A
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCCTAGGRAARAM
NGCTTTCTAGGAAN---
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G C T A G C G T A C T G A C T A G G T C A G T C A
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A A C G T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCCTAGGRAARAM
NNNCTTTCCAGGAAA---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G C T A G C G T A C T G A C T A G G T C A G T C A
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCCTAGGRAARAM
GCCTCAGGGCAT--
 A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G C T A G C G T A C T G A C T A G G T C A G T C A
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCCTAGGRAARAM
SCCTSAGGSCAW--
 A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G C T A G C G T A C T G A C T A G G T C A G T C A
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCCTAGGRAARAM------
NNCCTGNAAAAAAAAAAAAA
 A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G C T A G C G T A C T G A C T A G G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A