Information for 3-TGCACVTDCACACTTG (Motif 3)

A C G T A C T G A G T C G T C A A G T C T A G C C G A T C A G T A G T C C G T A A G T C C G T A A G T C C A G T C G A T A C T G
Reverse Opposite:
G T A C G C T A G T C A A C T G A C G T A C T G C G A T A C T G G T C A C G T A A C T G T C A G A C G T A C T G G T A C G T C A
p-value:1e-15
log p-value:-3.684e+01
Information Content per bp:1.764
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.9 +/- 32.2bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX21/MA0690.1/Jaspar

Match Rank:1
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:TGCACVTDCACACTTG
------TTCACACCTT
 A C G T A C T G A G T C G T C A A G T C T A G C C G A T C A G T A G T C C G T A A G T C C G T A A G T C C A G T C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

TBR1/MA0802.1/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TGCACVTDCACACTTG
-----TTTCACACCT-
 A C G T A C T G A G T C G T C A A G T C T A G C C G A T C A G T A G T C C G T A A G T C C G T A A G T C C A G T C G A T A C T G
A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:3
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TGCACVTDCACACTTG
-----KTTCACACCT-
 A C G T A C T G A G T C G T C A A G T C T A G C C G A T C A G T A G T C C G T A A G T C C G T A A G T C C A G T C G A T A C T G
A C G T A C G T A C G T A C G T A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGCACVTDCACACTTG
SNGCACCTGCHS-----
 A C G T A C G T A C T G A G T C G T C A A G T C T A G C C G A T C A G T A G T C C G T A A G T C C G T A A G T C C A G T C G A T A C T G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:5
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:TGCACVTDCACACTTG
-------TCACACCT-
 A C G T A C T G A G T C G T C A A G T C T A G C C G A T C A G T A G T C C G T A A G T C C G T A A G T C C A G T C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGCACVTDCACACTTG
---NTTTTCACACCTT
 A C G T A C T G A G T C G T C A A G T C T A G C C G A T C A G T A G T C C G T A A G T C C G T A A G T C C A G T C G A T A C T G
A C G T A C G T A C G T C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

MGA/MA0801.1/Jaspar

Match Rank:7
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:TGCACVTDCACACTTG
-------TCACACCT-
 A C G T A C T G A G T C G T C A A G T C T A G C C G A T C A G T A G T C C G T A A G T C C G T A A G T C C A G T C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGCACVTDCACACTTG
-GCACGTACCC-----
 A C G T A C T G A G T C G T C A A G T C T A G C C G A T C A G T A G T C C G T A A G T C C G T A A G T C C A G T C G A T A C T G
A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:9
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:TGCACVTDCACACTTG
-------TCACACCT-
 A C G T A C T G A G T C G T C A A G T C T A G C C G A T C A G T A G T C C G T A A G T C C G T A A G T C C A G T C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TGCACVTDCACACTTG
-----CTTCACACCTA
 A C G T A C T G A G T C G T C A A G T C T A G C C G A T C A G T A G T C C G T A A G T C C G T A A G T C C A G T C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A