Information for 8-TAAAATTTGT (Motif 11)

A G C T T G C A C T G A T G C A T G C A G C A T A G C T C G A T C T A G C G A T
Reverse Opposite:
G C T A G A T C G C T A T C G A C G T A A C G T A C G T G A C T A C G T T C G A
p-value:1e-9
log p-value:-2.160e+01
Information Content per bp:1.660
Number of Target Sequences with motif62.0
Percentage of Target Sequences with motif7.39%
Number of Background Sequences with motif1458.5
Percentage of Background Sequences with motif3.06%
Average Position of motif in Targets49.6 +/- 28.8bp
Average Position of motif in Background50.3 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0075.1_Hoxd10/Jaspar

Match Rank:1
Score:0.67
Offset:-7
Orientation:forward strand
Alignment:-------TAAAATTTGT
AATGCAATAAAATTTAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T G C A C T G A T G C A T G C A G C A T A G C T C G A T C T A G C G A T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PH0056.1_Hoxa9/Jaspar

Match Rank:2
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------TAAAATTTGT
ACGGCCATAAAATTAAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T G C A C T G A T G C A T G C A G C A T A G C T C G A T C T A G C G A T
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T

PB0175.1_Sox4_2/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TAAAATTTGT------
GGAAAAATTGTTAGGAA
 A C G T A G C T T G C A C T G A T G C A T G C A G C A T A G C T C G A T C T A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PH0057.1_Hoxb13/Jaspar

Match Rank:4
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------TAAAATTTGT
AACCCAATAAAATTCG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T G C A C T G A T G C A T G C A G C A T A G C T C G A T C T A G C G A T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G A C G T

HOXA5/MA0158.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TAAAATTTGT-
---AATTAGTG
 A G C T T G C A C T G A T G C A T G C A G C A T A G C T C G A T C T A G C G A T A C G T
A C G T A C G T A C G T T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------TAAAATTTGT
CTACCAATAAAATTCT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T G C A C T G A T G C A T G C A G C A T A G C T C G A T C T A G C G A T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:7
Score:0.60
Offset:-8
Orientation:forward strand
Alignment:--------TAAAATTTGT
AAAGCTCGTAAAATTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T G C A C T G A T G C A T G C A G C A T A G C T C G A T C T A G C G A T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TAAAATTTGT---
CTAATATTGCTAAA
 A C G T A G C T T G C A C T G A T G C A T G C A G C A T A G C T C G A T C T A G C G A T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TAAAATTTGT---
CTAATATTGCTAAA
 A C G T A G C T T G C A C T G A T G C A T G C A G C A T A G C T C G A T C T A G C G A T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PH0013.1_Cdx2/Jaspar

Match Rank:10
Score:0.60
Offset:-8
Orientation:forward strand
Alignment:--------TAAAATTTGT
AAAGGTAATAAAATTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T G C A C T G A T G C A T G C A G C A T A G C T C G A T C T A G C G A T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T A C G T A C G T