Information for 8-RTGTTTTTAA (Motif 6)

T C G A C G A T C T A G C G A T G C A T C A G T C A G T A C G T C G T A T C G A
Reverse Opposite:
A G C T G C A T T G C A G T C A G T C A C G T A G C T A G A T C G C T A A G C T
p-value:1e-22
log p-value:-5.239e+01
Information Content per bp:1.488
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.99%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets56.0 +/- 25.5bp
Average Position of motif in Background37.2 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2C/MA0497.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--RTGTTTTTAA---
TTCTATTTTTAGNNN
 A C G T A C G T T C G A C G A T C T A G C G A T G C A T C A G T C A G T A C G T C G T A T C G A A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:RTGTTTTTAA--
---ATTTGAATT
 T C G A C G A T C T A G C G A T G C A T C A G T C A G T A C G T C G T A T C G A A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

PB0187.1_Tcf7_2/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:RTGTTTTTAA-----
NNNTTTNTAATACNG
 T C G A C G A T C T A G C G A T G C A T C A G T C A G T A C G T C G T A T C G A A C G T A C G T A C G T A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

MEF2A/MA0052.3/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-RTGTTTTTAA-
TCTATTTTTAGA
 A C G T T C G A C G A T C T A G C G A T G C A T C A G T C A G T A C G T C G T A T C G A A C G T
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-RTGTTTTTAA-
KCTATTTTTRGH
 A C G T T C G A C G A T C T A G C G A T G C A T C A G T C A G T A C G T C G T A T C G A A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-RTGTTTTTAA-
GCTATTTTTAGC
 A C G T T C G A C G A T C T A G C G A T G C A T C A G T C A G T A C G T C G T A T C G A A C G T
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-RTGTTTTTAA-
CBTGTTTAYAWW
 A C G T T C G A C G A T C T A G C G A T G C A T C A G T C A G T A C G T C G T A T C G A A C G T
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--RTGTTTTTAA
TATTGTTTATT-
 A C G T A C G T T C G A C G A T C T A G C G A T G C A T C A G T C A G T A C G T C G T A T C G A
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:RTGTTTTTAA
-TGTTTAC--
 T C G A C G A T C T A G C G A T G C A T C A G T C A G T A C G T C G T A T C G A
A C G T G A C T T C A G C G A T C A G T C A G T C T G A A G T C A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:RTGTTTTTAA--
NTGTTTAYATWW
 T C G A C G A T C T A G C G A T G C A T C A G T C A G T A C G T C G T A T C G A A C G T A C G T
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A