Information for 19-GAGACACAKGTCT (Motif 27)

T C A G C G T A A T C G C G T A T G A C G T C A A T G C T C G A A C G T T A C G C A G T T A G C G A C T
Reverse Opposite:
C T G A A T C G G T C A A T G C T G C A A G C T T A C G A C G T A C T G C G A T T A G C C G A T A G T C
p-value:1e-11
log p-value:-2.552e+01
Information Content per bp:1.614
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets49.8 +/- 29.3bp
Average Position of motif in Background63.5 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist2/MA0633.1/Jaspar

Match Rank:1
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GAGACACAKGTCT
--NACATATGGN-
 T C A G C G T A A T C G C G T A T G A C G T C A A T G C T C G A A C G T T A C G C A G T T A G C G A C T
A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAGACACAKGTCT
--AACATATGTC-
 T C A G C G T A A T C G C G T A T G A C G T C A A T G C T C G A A C G T T A C G C A G T T A G C G A C T
A C G T A C G T T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GAGACACAKGTCT
AAACAGACAAAGGAAT
 A C G T A C G T A C G T T C A G C G T A A T C G C G T A T G A C G T C A A T G C T C G A A C G T T A C G C A G T T A G C G A C T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GAGACACAKGTCT
AAAACAAAGG---
 T C A G C G T A A T C G C G T A T G A C G T C A A T G C T C G A A C G T T A C G C A G T T A G C G A C T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAGACACAKGTCT
AGGAAACAGCTG---
 A C G T A C G T T C A G C G T A A T C G C G T A T G A C G T C A A T G C T C G A A C G T T A C G C A G T T A G C G A C T
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GAGACACAKGTCT
NTTGATACATT-----
 A C G T A C G T A C G T T C A G C G T A A T C G C G T A T G A C G T C A A T G C T C G A A C G T T A C G C A G T T A G C G A C T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----GAGACACAKGTCT
AGGTGNCAGACAG----
 A C G T A C G T A C G T A C G T T C A G C G T A A T C G C G T A T G A C G T C A A T G C T C G A A C G T T A C G C A G T T A G C G A C T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GAGACACAKGTCT---
AAGGCCAGATGGTCCGG
 A C G T T C A G C G T A A T C G C G T A T G A C G T C A A T G C T C G A A C G T T A C G C A G T T A G C G A C T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

Bhlha15/MA0607.1/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GAGACACAKGTCT
---ACATATGG--
 T C A G C G T A A T C G C G T A T G A C G T C A A T G C T C G A A C G T T A C G C A G T T A G C G A C T
A C G T A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GAGACACAKGTCT-
GCAAAACATTACTA
 T C A G C G T A A T C G C G T A T G A C G T C A A T G C T C G A A C G T T A C G C A G T T A G C G A C T A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A