Information for 19-GAASTACTGA (Motif 19)

A C T G C G T A C G T A T A C G G C A T C G T A G T A C A C G T A C T G C G T A
Reverse Opposite:
A C G T T G A C C G T A A C T G C G A T C G T A A T G C C G A T A C G T A G T C
p-value:1e-14
log p-value:-3.262e+01
Information Content per bp:1.840
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets51.2 +/- 25.7bp
Average Position of motif in Background61.3 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0117.1_Nkx3-1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GAASTACTGA----
TACTAAGTACTTAAATG
 A C G T A C G T A C G T A C T G C G T A C G T A T A C G G C A T C G T A G T A C A C G T A C T G C G T A A C G T A C G T A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GAASTACTGA-
-AAGCACTTAA
 A C T G C G T A C G T A T A C G G C A T C G T A G T A C A C G T A C T G C G T A A C G T
A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

PH0112.1_Nkx2-3/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GAASTACTGA---
CNTTAAGTACTTAANG
 A C G T A C G T A C G T A C T G C G T A C G T A T A C G G C A T C G T A G T A C A C G T A C T G C G T A A C G T A C G T A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

PH0028.1_En1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAASTACTGA----
GCGAACTAATTAATGC
 A C G T A C G T A C T G C G T A C G T A T A C G G C A T C G T A G T A C A C G T A C T G C G T A A C G T A C G T A C G T A C G T
T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C

PH0116.1_Nkx2-9/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GAASTACTGA----
TTTTAAGTACTTAAATT
 A C G T A C G T A C G T A C T G C G T A C G T A T A C G G C A T C G T A G T A C A C G T A C T G C G T A A C G T A C G T A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAASTACTGA----
AAAWWTGCTGACWWD
 A C G T A C T G C G T A C G T A T A C G G C A T C G T A G T A C A C G T A C T G C G T A A C G T A C G T A C G T A C G T
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

PH0020.1_Dlx1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAASTACTGA--
CTGAGGTAATTAAT
 A C G T A C G T A C T G C G T A C G T A T A C G G C A T C G T A G T A C A C G T A C T G C G T A A C G T A C G T
A G T C A G C T C T A G T G C A C T A G C T A G G A C T T C G A C G T A C G A T A C G T C T G A C G T A A G C T

Mafb/MA0117.2/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAASTACTGA--
AAAATGCTGACT
 A C T G C G T A C G T A T A C G G C A T C G T A G T A C A C G T A C T G C G T A A C G T A C G T
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAASTACTGA-----
AAANTGCTGACTNAG
 A C T G C G T A C G T A T A C G G C A T C G T A G T A C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

PH0058.1_Hoxb3/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAASTACTGA------
TGAGCTAATTAGTTGGA
 A C G T A C T G C G T A C G T A T A C G G C A T C G T A G T A C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T C A G T G C A T A C G A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A G C T C A G T T C A G C T A G C G T A