Information for 13-AGGATTTTGC (Motif 16)

C G T A A T C G T C A G C G T A A G C T C A G T A G C T C G A T C A T G G A T C
Reverse Opposite:
C T A G G A T C C G T A T C G A G T C A T C G A G C A T A G T C T A G C G C A T
p-value:1e-15
log p-value:-3.556e+01
Information Content per bp:1.684
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.23%
Number of Background Sequences with motif10.7
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets47.8 +/- 26.1bp
Average Position of motif in Background40.1 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGGATTTTGC-----
ANATTTTTGCAANTN
 C G T A A T C G T C A G C G T A A G C T C A G T A G C T C G A T C A T G G A T C A C G T A C G T A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGGATTTTGC-----
TGGACTTTGNNCTCN
 C G T A A T C G T C A G C G T A A G C T C A G T A G C T C G A T C A T G G A T C A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGGATTTTGC------
TGGACTTTGNNCTNTG
 C G T A A T C G T C A G C G T A A G C T C A G T A G C T C G A T C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

PB0181.1_Spdef_2/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AGGATTTTGC-
CTACTAGGATGTNNTN
 A C G T A C G T A C G T A C G T A C G T C G T A A T C G T C A G C G T A A G C T C A G T A G C T C G A T C A T G G A T C A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

Hnf4a/MA0114.3/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGGATTTTGC----
ATTGGACTTTGACCCC
 A C G T A C G T C G T A A T C G T C A G C G T A A G C T C A G T A G C T C G A T C A T G G A T C A C G T A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGGATTTTGC
ACAGGATGTGGT
 A C G T A C G T C G T A A T C G T C A G C G T A A G C T C A G T A G C T C G A T C A T G G A T C
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGGATTTTGC
GGGAATTTCC
 C G T A A T C G T C A G C G T A A G C T C A G T A G C T C G A T C A T G G A T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGGATTTTGC--
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T C G T A A T C G T C A G C G T A A G C T C A G T A G C T C G A T C A T G G A T C A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PB0136.1_IRC900814_2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGGATTTTGC--
TTTTACGACTTTCCAT
 A C G T A C G T A C G T A C G T C G T A A T C G T C A G C G T A A G C T C A G T A G C T C G A T C A T G G A T C A C G T A C G T
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGGATTTTGC
GGGAATTTCC
 C G T A A T C G T C A G C G T A A G C T C A G T A G C T C G A T C A T G G A T C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C