Information for 6-TATTATGCTT (Motif 9)

A G C T C G T A A C G T A C G T C T G A C G A T T A C G A G T C C A G T A C G T
Reverse Opposite:
C G T A G C T A C T A G A T G C C G T A A G C T C G T A C G T A C G A T C T G A
p-value:1e-8
log p-value:-2.005e+01
Information Content per bp:1.848
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif37.5
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets46.8 +/- 25.9bp
Average Position of motif in Background47.8 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TATTATGCTT-----
TNNATTATGCATANNTT
 A C G T A C G T A G C T C G T A A C G T A C G T C T G A C G A T T A C G A G T C C A G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TATTATGCTT
TGAATTATGCAT
 A C G T A C G T A G C T C G T A A C G T A C G T C T G A C G A T T A C G A G T C C A G T A C G T
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TATTATGCTT---
NANTATTATAATTNNN
 A C G T A C G T A C G T A G C T C G T A A C G T A C G T C T G A C G A T T A C G A G T C C A G T A C G T A C G T A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0064.1_Sox14_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TATTATGCTT---
NNTAATTATAATTNNN
 A C G T A C G T A C G T A G C T C G T A A C G T A C G T C T G A C G A T T A C G A G T C C A G T A C G T A C G T A C G T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TATTATGCTT
GAATATTCAT
 A G C T C G T A A C G T A C G T C T G A C G A T T A C G A G T C C A G T A C G T
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TATTATGCTT--
ATGCATWATGCATRW
 A C G T A C G T A C G T A G C T C G T A A C G T A C G T C T G A C G A T T A C G A G T C C A G T A C G T A C G T A C G T
C G T A A C G T A C T G G T A C C G T A A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T C T G A G C A T

PB0176.1_Sox5_2/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TATTATGCTT
NNCTNAATTATGANN
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A A C G T A C G T C T G A C G A T T A C G A G T C C A G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

PB0069.1_Sox21_1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TATTATGCTT---
NNTAATTATAATNANN
 A C G T A C G T A C G T A G C T C G T A A C G T A C G T C T G A C G A T T A C G A G T C C A G T A C G T A C G T A C G T A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TATTATGCTT
AAGATATCCTT
 A C G T A G C T C G T A A C G T A C G T C T G A C G A T T A C G A G T C C A G T A C G T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

PB0074.1_Sox8_1/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TATTATGCTT--
GTATCTATTGTTCTTTA
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A A C G T A C G T C T G A C G A T T A C G A G T C C A G T A C G T A C G T A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A