Information for 6-MMKGGCCKMTASAGGC (Motif 5)

T G C A T G A C A C G T A C T G A C T G A G T C A G T C C A G T G T A C A C G T C T G A A T C G C G T A A C T G A C T G G T A C
Reverse Opposite:
A C T G A G T C A G T C A C G T A T G C A G C T C G T A C A T G G T C A A C T G A C T G A G T C A G T C G T C A A C T G A C G T
p-value:1e-13
log p-value:-3.086e+01
Information Content per bp:1.820
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.1 +/- 20.7bp
Average Position of motif in Background50.0 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----MMKGGCCKMTASAGGC
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T T G C A T G A C A C G T A C T G A C T G A G T C A G T C C A G T G T A C A C G T C T G A A T C G C G T A A C T G A C T G G T A C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--MMKGGCCKMTASAGGC--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T T G C A T G A C A C G T A C T G A C T G A G T C A G T C C A G T G T A C A C G T C T G A A T C G C G T A A C T G A C T G G T A C A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-MMKGGCCKMTASAGGC--
TAGCGCCCCCTGGTGGCCA
 A C G T T G C A T G A C A C G T A C T G A C T G A G T C A G T C C A G T G T A C A C G T C T G A A T C G C G T A A C T G A C T G G T A C A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:MMKGGCCKMTASAGGC
----GNCTATAAAAGG
 T G C A T G A C A C G T A C T G A C T G A G T C A G T C C A G T G T A C A C G T C T G A A T C G C G T A A C T G A C T G G T A C
A C G T A C G T A C G T A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:MMKGGCCKMTASAGGC
CTAGGCCT--------
 T G C A T G A C A C G T A C T G A C T G A G T C A G T C C A G T G T A C A C G T C T G A A T C G C G T A A C T G A C T G G T A C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:MMKGGCCKMTASAGGC
CNAGGCCT--------
 T G C A T G A C A C G T A C T G A C T G A G T C A G T C C A G T G T A C A C G T C T G A A T C G C G T A A C T G A C T G G T A C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:7
Score:0.49
Offset:3
Orientation:forward strand
Alignment:MMKGGCCKMTASAGGC--
---GGTCANYTGAGGWCA
 T G C A T G A C A C G T A C T G A C T G A G T C A G T C C A G T G T A C A C G T C T G A A T C G C G T A A C T G A C T G G T A C A C G T A C G T
A C G T A C G T A C G T C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

PB0128.1_Gcm1_2/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:forward strand
Alignment:MMKGGCCKMTASAGGC----
---TGCGCATAGGGGAGGAG
 T G C A T G A C A C G T A C T G A C T G A G T C A G T C C A G T G T A C A C G T C T G A A T C G C G T A A C T G A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----MMKGGCCKMTASAGGC
GGGGCCGAGGCCTG-------
 A C G T A C G T A C G T A C G T A C G T T G C A T G A C A C G T A C T G A C T G A G T C A G T C C A G T G T A C A C G T C T G A A T C G C G T A A C T G A C T G G T A C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.48
Offset:4
Orientation:forward strand
Alignment:MMKGGCCKMTASAGGC
----GRTGMTRGAGCC
 T G C A T G A C A C G T A C T G A C T G A G T C A G T C C A G T G T A C A C G T C T G A A T C G C G T A A C T G A C T G G T A C
A C G T A C G T A C G T A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C