Information for 12-TTTGGCACTGTGT (Motif 9)

A C G T G C A T C G A T C T A G A C T G A G T C G T C A A G T C A C G T A C T G A C G T A T C G A C G T
Reverse Opposite:
G T C A A T G C C G T A A G T C C G T A A C T G A C G T A C T G A G T C A G T C C G T A C G T A T G C A
p-value:1e-12
log p-value:-2.952e+01
Information Content per bp:1.852
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.1 +/- 29.0bp
Average Position of motif in Background45.6 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTTGGCACTGTGT
NNTTGGCANN----
 A C G T A C G T G C A T C G A T C T A G A C T G A G T C G T C A A G T C A C G T A C T G A C G T A T C G A C G T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.61
Offset:6
Orientation:forward strand
Alignment:TTTGGCACTGTGT
------GCTGTG-
 A C G T G C A T C G A T C T A G A C T G A G T C G T C A A G T C A C G T A C T G A C G T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTTGGCACTGTGT
NTTGGCANN----
 A C G T G C A T C G A T C T A G A C T G A G T C G T C A A G T C A C G T A C T G A C G T A T C G A C G T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTTGGCACTGTGT-
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T G C A T C G A T C T A G A C T G A G T C G T C A A G T C A C G T A C T G A C G T A T C G A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTTGGCACTGTGT
-TTGGCA------
 A C G T G C A T C G A T C T A G A C T G A G T C G T C A A G T C A C G T A C T G A C G T A T C G A C G T
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTTGGCACTGTGT
GGTTGGCAT-----
 A C G T A C G T G C A T C G A T C T A G A C T G A G T C G T C A A G T C A C G T A C T G A C G T A T C G A C G T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.56
Offset:7
Orientation:forward strand
Alignment:TTTGGCACTGTGT
-------CTTTGT
 A C G T G C A T C G A T C T A G A C T G A G T C G T C A A G T C A C G T A C T G A C G T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTTGGCACTGTGT--
-TTGGCATGGTGCCA
 A C G T G C A T C G A T C T A G A C T G A G T C G T C A A G T C A C G T A C T G A C G T A T C G A C G T A C G T A C G T
A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TTTGGCACTGTGT
-AGGVNCCTTTGT
 A C G T G C A T C G A T C T A G A C T G A G T C G T C A A G T C A C G T A C T G A C G T A T C G A C G T
A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TTTGGCACTGTGT
CTTGGCAA-----
 A C G T G C A T C G A T C T A G A C T G A G T C G T C A A G T C A C G T A C T G A C G T A T C G A C G T
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T