Information for 7-RAAACAWRCACAG (Motif 4)

C T A G C T G A C G T A G T C A A T G C G T C A C G A T C T G A A G T C C G T A A T G C C G T A A C T G
Reverse Opposite:
A G T C A C G T A T C G A C G T C T A G A G C T C G T A A C G T A T C G A C G T A C G T A G C T A G T C
p-value:1e-15
log p-value:-3.539e+01
Information Content per bp:1.822
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif12.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets27.3 +/- 28.7bp
Average Position of motif in Background44.9 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.63
Offset:8
Orientation:reverse strand
Alignment:RAAACAWRCACAG-
--------CACAGN
 C T A G C T G A C G T A G T C A A T G C G T C A C G A T C T G A A G T C C G T A A T G C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---RAAACAWRCACAG
ACTGAAACCA------
 A C G T A C G T A C G T C T A G C T G A C G T A G T C A A T G C G T C A C G A T C T G A A G T C C G T A A T G C C G T A A C T G
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:RAAACAWRCACAG
-AAACAAACATTC
 C T A G C T G A C G T A G T C A A T G C G T C A C G A T C T G A A G T C C G T A A T G C C G T A A C T G
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:RAAACAWRCACAG
---CCAGGAACAG
 C T A G C T G A C G T A G T C A A T G C G T C A C G A T C T G A A G T C C G T A A T G C C G T A A C T G
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--RAAACAWRCACAG
GAAAAAATTGCAAGG
 A C G T A C G T C T A G C T G A C G T A G T C A A T G C G T C A C G A T C T G A A G T C C G T A A T G C C G T A A C T G
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

POL007.1_BREd/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:RAAACAWRCACAG
--NANANAC----
 C T A G C T G A C G T A G T C A A T G C G T C A C G A T C T G A A G T C C G T A A T G C C G T A A C T G
A C G T A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T A C G T A C G T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----RAAACAWRCACAG--
AADGAGVCANYASTACAGNC
 A C G T A C G T A C G T A C G T A C G T C T A G C T G A C G T A G T C A A T G C G T C A C G A T C T G A A G T C C G T A A T G C C G T A A C T G A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:RAAACAWRCACAG-
----AAACCACAGC
 C T A G C T G A C G T A G T C A A T G C G T C A C G A T C T G A A G T C C G T A A T G C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:RAAACAWRCACAG-------
-----GAGCACAGCAGGACA
 C T A G C T G A C G T A G T C A A T G C G T C A C G A T C T G A A G T C C G T A A T G C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:RAAACAWRCACAG
-AAATAAACA---
 C T A G C T G A C G T A G T C A A T G C G T C A C G A T C T G A A G T C C G T A A T G C C G T A A C T G
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T