Information for 5-AGYCATCARGSYTTKS (Motif 14)

C G T A A C T G A G T C A G T C G T C A A C G T A T G C C G T A C T G A A C T G A T G C A G T C C G A T A C G T A C G T A T G C
Reverse Opposite:
A T C G G T C A C G T A C G T A C T A G A T C G A G T C A G C T A C G T A T C G G T C A A C G T A C T G C T A G A G T C A C G T
p-value:1e-9
log p-value:-2.180e+01
Information Content per bp:1.843
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.8 +/- 30.4bp
Average Position of motif in Background63.2 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGYCATCARGSYTTKS
GGCCATTAAC------
 C G T A A C T G A G T C A G T C G T C A A C G T A T G C C G T A C T G A A C T G A T G C A G T C C G A T A C G T A C G T A T G C
C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T A C G T A C G T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGYCATCARGSYTTKS
TCACCCATCAATAAACA-
 A C G T A C G T C G T A A C T G A G T C A G T C G T C A A C G T A T G C C G T A C T G A A C T G A T G C A G T C C G A T A C G T A C G T A T G C
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGYCATCARGSYTTKS
TGAGTCAGCA--------
 A C G T A C G T C G T A A C T G A G T C A G T C G T C A A C G T A T G C C G T A C T G A A C T G A T G C A G T C C G A T A C G T A C G T A T G C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGYCATCARGSYTTKS
-GTCATN---------
 C G T A A C T G A G T C A G T C G T C A A C G T A T G C C G T A C T G A A C T G A T G C A G T C C G A T A C G T A C G T A T G C
A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AGYCATCARGSYTTKS
CCNNACCATCTGGCCTN--
 A C G T A C G T A C G T C G T A A C T G A G T C A G T C G T C A A C G T A T G C C G T A C T G A A C T G A T G C A G T C C G A T A C G T A C G T A T G C
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGYCATCARGSYTTKS
GYCATCMATCAT-------
 A C G T A C G T A C G T C G T A A C T G A G T C A G T C G T C A A C G T A T G C C G T A C T G A A C T G A T G C A G T C C G A T A C G T A C G T A T G C
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AGYCATCARGSYTTKS
AAGTCAGCANTTTTN--
 A C G T C G T A A C T G A G T C A G T C G T C A A C G T A T G C C G T A C T G A A C T G A T G C A G T C C G A T A C G T A C G T A T G C
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGYCATCARGSYTTKS
ACGTCATC---------
 A C G T C G T A A C T G A G T C A G T C G T C A A C G T A T G C C G T A C T G A A C T G A T G C A G T C C G A T A C G T A C G T A T G C
C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGYCATCARGSYTTKS
RGCCATYAATCA----
 C G T A A C T G A G T C A G T C G T C A A C G T A T G C C G T A C T G A A C T G A T G C A G T C C G A T A C G T A C G T A T G C
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:10
Score:0.51
Offset:6
Orientation:forward strand
Alignment:AGYCATCARGSYTTKS
------CAAGCTT---
 C G T A A C T G A G T C A G T C G T C A A C G T A T G C C G T A C T G A A C T G A T G C A G T C C G A T A C G T A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T