Information for 7-CCCGGGACTGACC (Motif 7)

A G T C G T A C A G T C A C T G A C T G A C T G C G T A G T A C G A C T A C T G G T C A A T G C A G T C
Reverse Opposite:
A C T G A T C G A C G T A G T C C T G A A C T G A C G T A G T C A G T C A G T C C T A G A C T G A C T G
p-value:1e-11
log p-value:-2.687e+01
Information Content per bp:1.863
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets31.9 +/- 22.2bp
Average Position of motif in Background54.5 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CCCGGGACTGACC-
----GGAAANCCCC
 A G T C G T A C A G T C A C T G A C T G A C T G C G T A G T A C G A C T A C T G G T C A A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCCGGGACTGACC--
---GGGAAATCCCCN
 A G T C G T A C A G T C A C T G A C T G A C T G C G T A G T A C G A C T A C T G G T C A A T G C A G T C A C G T A C G T
A C G T A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCCGGGACTGACC
---GGGAATTTCC
 A G T C G T A C A G T C A C T G A C T G A C T G C G T A G T A C G A C T A C T G G T C A A T G C A G T C
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCCGGGACTGACC
CSTGGGAAAD---
 A G T C G T A C A G T C A C T G A C T G A C T G C G T A G T A C G A C T A C T G G T C A A T G C A G T C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCCGGGACTGACC-
-AGGGGAATCCCCT
 A G T C G T A C A G T C A C T G A C T G A C T G C G T A G T A C G A C T A C T G G T C A A T G C A G T C A C G T
A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

EBF1/MA0154.3/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CCCGGGACTGACC
ATTCCCAAGGGAAT----
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G T C A C T G A C T G A C T G C G T A G T A C G A C T A C T G G T C A A T G C A G T C
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:CCCGGGACTGACC-
--------TGACCT
 A G T C G T A C A G T C A C T G A C T G A C T G C G T A G T A C G A C T A C T G G T C A A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCCGGGACTGACC
---GGGAATTTCC
 A G T C G T A C A G T C A C T G A C T G A C T G C G T A G T A C G A C T A C T G G T C A A T G C A G T C
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCCGGGACTGACC
TCCCNNGGGACN----
 A C G T A C G T A C G T A G T C G T A C A G T C A C T G A C T G A C T G C G T A G T A C G A C T A C T G G T C A A T G C A G T C
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCCGGGACTGACC
-GGGGGAATCCCC
 A G T C G T A C A G T C A C T G A C T G A C T G C G T A G T A C G A C T A C T G G T C A A T G C A G T C
A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C