Information for 5-AGGCAGABAGMASCCC (Motif 11)

C G T A A C T G C T A G T A G C C G T A C T A G G T C A A C T G C T G A C T A G G T A C G T C A A T G C G T A C T G A C A G T C
Reverse Opposite:
A C T G A C T G A C T G A T C G A C G T A C T G A G T C A G C T T G A C A C G T A G T C C G A T A C T G A G T C T G A C C G A T
p-value:1e-9
log p-value:-2.277e+01
Information Content per bp:1.734
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets36.0 +/- 24.2bp
Average Position of motif in Background36.8 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AGGCAGABAGMASCCC-----
----NNNNGGTACCCCCCANN
 C G T A A C T G C T A G T A G C C G T A C T A G G T C A A C T G C T G A C T A G G T A C G T C A A T G C G T A C T G A C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:AGGCAGABAGMASCCC
AGAGRRACAGCWGAC-
 C G T A A C T G C T A G T A G C C G T A C T A G G T C A A C T G C T G A C T A G G T A C G T C A A T G C G T A C T G A C A G T C
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:AGGCAGABAGMASCCC
--------NGAAGC--
 C G T A A C T G C T A G T A G C C G T A C T A G G T C A A C T G C T G A C T A G G T A C G T C A A T G C G T A C T G A C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:4
Score:0.49
Offset:0
Orientation:forward strand
Alignment:AGGCAGABAGMASCCC
AGGGTAACAGC-----
 C G T A A C T G C T A G T A G C C G T A C T A G G T C A A C T G C T G A C T A G G T A C G T C A A T G C G T A C T G A C A G T C
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--AGGCAGABAGMASCCC
TAGGGCAAAGGTCA----
 A C G T A C G T C G T A A C T G C T A G T A G C C G T A C T A G G T C A A C T G C T G A C T A G G T A C G T C A A T G C G T A C T G A C A G T C
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:6
Score:0.46
Offset:-2
Orientation:reverse strand
Alignment:--AGGCAGABAGMASCCC
WNAGTCADAVTGAAACTN
 A C G T A C G T C G T A A C T G C T A G T A G C C G T A C T A G G T C A A C T G C T G A C T A G G T A C G T C A A T G C G T A C T G A C A G T C
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

PB0050.1_Osr1_1/Jaspar

Match Rank:7
Score:0.46
Offset:2
Orientation:forward strand
Alignment:AGGCAGABAGMASCCC--
--ATTTACAGTAGCAAAA
 C G T A A C T G C T A G T A G C C G T A C T A G G T C A A C T G C T G A C T A G G T A C G T C A A T G C G T A C T G A C A G T C A C G T A C G T
A C G T A C G T G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:8
Score:0.46
Offset:5
Orientation:forward strand
Alignment:AGGCAGABAGMASCCC-
-----GGGGGAATCCCC
 C G T A A C T G C T A G T A G C C G T A C T A G G T C A A C T G C T G A C T A G G T A C G T C A A T G C G T A C T G A C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.45
Offset:-3
Orientation:forward strand
Alignment:---AGGCAGABAGMASCCC
GTAGGGCAAAGGTCA----
 A C G T A C G T A C G T C G T A A C T G C T A G T A G C C G T A C T A G G T C A A C T G C T G A C T A G G T A C G T C A A T G C G T A C T G A C A G T C
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.45
Offset:3
Orientation:forward strand
Alignment:AGGCAGABAGMASCCC--
---ADGGYAGYAGCATCT
 C G T A A C T G C T A G T A G C C G T A C T A G G T C A A C T G C T G A C T A G G T A C G T C A A T G C G T A C T G A C A G T C A C G T A C G T
A C G T A C G T A C G T C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T