Information for 11-GAGCGGGAGCGGG (Motif 11)

A C T G G T C A A T C G G T A C A C T G A T C G A T C G G T C A A C T G A T G C A T C G T A C G A T C G
Reverse Opposite:
A T G C A G T C A T G C A T C G T A G C A C G T A T G C A T G C A G T C A C T G A T G C C A G T A G T C
p-value:1e-5
log p-value:-1.326e+01
Information Content per bp:1.802
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif46.9
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets49.5 +/- 24.1bp
Average Position of motif in Background46.3 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GAGCGGGAGCGGG
GGGCGGGACC---
 A C T G G T C A A T C G G T A C A C T G A T C G A T C G G T C A A C T G A T G C A T C G T A C G A T C G
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GAGCGGGAGCGGG
ANTGCGGGGGCGGN
 A C G T A C T G G T C A A T C G G T A C A C T G A T C G A T C G G T C A A C T G A T G C A T C G T A C G A T C G
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A

EGR1/MA0162.2/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GAGCGGGAGCGGG--
-GGCGGGGGCGGGGG
 A C T G G T C A A T C G G T A C A C T G A T C G A T C G G T C A A C T G A T G C A T C G T A C G A T C G A C G T A C G T
A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GAGCGGGAGCGGG--
GGGNGGGGGCGGGGC
 A C T G G T C A A T C G G T A C A C T G A T C G A T C G G T C A A C T G A T G C A T C G T A C G A T C G A C G T A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAGCGGGAGCGGG---
NNNAAGGGGGCGGGNNN
 A C G T A C T G G T C A A T C G G T A C A C T G A T C G A T C G G T C A A C T G A T G C A T C G T A C G A T C G A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

E2F6/MA0471.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAGCGGGAGCGGG
GGGCGGGAAGG--
 A C T G G T C A A T C G G T A C A C T G A T C G A T C G G T C A A C T G A T G C A T C G T A C G A T C G
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAGCGGGAGCGGG
GTGGGGGAGGGG-
 A C T G G T C A A T C G G T A C A C T G A T C G A T C G G T C A A C T G A T G C A T C G T A C G A T C G
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAGCGGGAGCGGG
GAGSCCGAGC---
 A C T G G T C A A T C G G T A C A C T G A T C G A T C G G T C A A C T G A T G C A T C G T A C G A T C G
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAGCGGGAGCGGG
GGGCGGGAAGG--
 A C T G G T C A A T C G G T A C A C T G A T C G A T C G G T C A A C T G A T G C A T C G T A C G A T C G
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAGCGGGAGCGGG-
ANTGCGTGGGCGTNN
 A C G T A C T G G T C A A T C G G T A C A C T G A T C G A T C G G T C A A C T G A T G C A T C G T A C G A T C G A C G T
C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G