Information for 9-TGGTTGACAT (Motif 10)

C G A T A C T G A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T A G T C C G T A C G T A A G T C A G T C C G T A
p-value:1e-7
log p-value:-1.627e+01
Information Content per bp:1.960
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.6 +/- 32.2bp
Average Position of motif in Background53.0 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---TGGTTGACAT---
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T C G A T A C T G A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.72
Offset:3
Orientation:forward strand
Alignment:TGGTTGACAT-
---TTGACAGG
 C G A T A C T G A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.72
Offset:3
Orientation:forward strand
Alignment:TGGTTGACAT
---TTGACAG
 C G A T A C T G A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TGGTTGACAT
-GGTTGGCAT
 C G A T A C T G A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TGGTTGACAT-
---YTGWCADY
 C G A T A C T G A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TGGTTGACAT
-ARNTGACA-
 C G A T A C T G A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGGTTGACAT-
NTGATTGACAGN
 A C G T C G A T A C T G A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TGGTTGACAT-
---TTGACAGC
 C G A T A C T G A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:9
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGGTTGACAT-
BTGABTGACAGS
 A C G T C G A T A C T G A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Nr2e1/MA0676.1/Jaspar

Match Rank:10
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TGGTTGACAT--
---TTGACTTTT
 C G A T A C T G A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T