Information for 4-VCGCCGGCTGCCGGCG (Motif 8)

T A G C A G T C A C T G A T G C A G T C A C T G A T C G A G T C C G A T A T C G A G T C G A T C A C T G A C T G A G T C A C T G
Reverse Opposite:
G T A C T A C G A G T C T A G C C A T G A C T G A T G C C G T A A C T G A T G C G T A C C T A G A T C G A G T C A C T G A C T G
p-value:1e-8
log p-value:-1.948e+01
Information Content per bp:1.772
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.2 +/- 29.3bp
Average Position of motif in Background39.2 +/- 9.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----VCGCCGGCTGCCGGCG
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T T A G C A G T C A C T G A T G C A G T C A C T G A T C G A G T C C G A T A T C G A G T C G A T C A C T G A C T G A G T C A C T G
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--VCGCCGGCTGCCGGCG-
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T T A G C A G T C A C T G A T G C A G T C A C T G A T C G A G T C C G A T A T C G A G T C G A T C A C T G A C T G A G T C A C T G A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:VCGCCGGCTGCCGGCG
TGGCAGNCTGCCAG--
 T A G C A G T C A C T G A T G C A G T C A C T G A T C G A G T C C G A T A T C G A G T C G A T C A C T G A C T G A G T C A C T G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---VCGCCGGCTGCCGGCG-
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T T A G C A G T C A C T G A T G C A G T C A C T G A T C G A G T C C G A T A T C G A G T C G A T C A C T G A C T G A G T C A C T G A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

ELK4/MA0076.2/Jaspar

Match Rank:5
Score:0.50
Offset:4
Orientation:forward strand
Alignment:VCGCCGGCTGCCGGCG
----CCACTTCCGGC-
 T A G C A G T C A C T G A T G C A G T C A C T G A T C G A G T C C G A T A T C G A G T C G A T C A C T G A C T G A G T C A C T G
A C G T A C G T A C G T A C G T A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:VCGCCGGCTGCCGGCG---
-------SDGCAGGTGCNS
 T A G C A G T C A C T G A T G C A G T C A C T G A T C G A G T C C G A T A T C G A G T C G A T C A C T G A C T G A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

Gabpa/MA0062.2/Jaspar

Match Rank:7
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:VCGCCGGCTGCCGGCG
---NCCACTTCCGG--
 T A G C A G T C A C T G A T G C A G T C A C T G A T C G A G T C C G A T A T C G A G T C G A T C A C T G A C T G A G T C A C T G
A C G T A C G T A C G T A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:VCGCCGGCTGCCGGCG
-----NGCTN------
 T A G C A G T C A C T G A T G C A G T C A C T G A T C G A G T C C G A T A T C G A G T C G A T C A C T G A C T G A G T C A C T G
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.48
Offset:3
Orientation:forward strand
Alignment:VCGCCGGCTGCCGGCG
---NCAGCTGCTG---
 T A G C A G T C A C T G A T G C A G T C A C T G A T C G A G T C C G A T A T C G A G T C G A T C A C T G A C T G A G T C A C T G
A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.47
Offset:1
Orientation:forward strand
Alignment:VCGCCGGCTGCCGGCG
-CGCCTCAGGCA----
 T A G C A G T C A C T G A T G C A G T C A C T G A T C G A G T C C G A T A T C G A G T C G A T C A C T G A C T G A G T C A C T G
A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T