Information for 9-GCCTAGCCTCTAC (Motif 14)

A C T G A G T C A G T C A C G T C G T A A C T G A G T C A G T C A C G T A G T C A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C T G C G T A A C T G A C T G A G T C A C G T C G T A A C T G A C T G A G T C
p-value:1e-7
log p-value:-1.680e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.2 +/- 27.6bp
Average Position of motif in Background49.6 +/- 2.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCCTAGCCTCTAC
AGGCCTAG-------
 A C G T A C G T A C T G A G T C A G T C A C G T C G T A A C T G A G T C A G T C A C G T A G T C A C G T C G T A A G T C
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:2
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCCTAGCCTCTAC
NNGGCCACGCCTTTN-
 A C G T A C G T A C G T A C T G A G T C A G T C A C G T C G T A A C T G A G T C A G T C A C G T A G T C A C G T C G T A A G T C
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GCCTAGCCTCTAC
GGCCCCGCCCCC--
 A C G T A C T G A G T C A G T C A C G T C G T A A C T G A G T C A G T C A C G T A G T C A C G T C G T A A G T C
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GCCTAGCCTCTAC
CGTCTAGACA----
 A C G T A C T G A G T C A G T C A C G T C G T A A C T G A G T C A G T C A C G T A G T C A C G T C G T A A G T C
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCCTAGCCTCTAC
NNACTTGCCTT---
 A C G T A C T G A G T C A G T C A C G T C G T A A C T G A G T C A G T C A C G T A G T C A C G T C G T A A G T C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GCCTAGCCTCTAC
AGGCCTNG-------
 A C G T A C G T A C T G A G T C A G T C A C G T C G T A A C T G A G T C A G T C A C G T A G T C A C G T C G T A A G T C
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GCCTAGCCTCTAC
TGCCCAGNHW----
 A C G T A C T G A G T C A G T C A C G T C G T A A C T G A G T C A G T C A C G T A G T C A C G T C G T A A G T C
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GCCTAGCCTCTAC
GCTCGGSCTC---
 A C T G A G T C A G T C A C G T C G T A A C T G A G T C A G T C A C G T A G T C A C G T C G T A A G T C
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GCCTAGCCTCTAC
--BCAGACWA---
 A C T G A G T C A G T C A C G T C G T A A C T G A G T C A G T C A C G T A G T C A C G T C G T A A G T C
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.48
Offset:0
Orientation:forward strand
Alignment:GCCTAGCCTCTAC
SCCTAGCAACAG-
 A C T G A G T C A G T C A C G T C G T A A C T G A G T C A G T C A C G T A G T C A C G T C G T A A G T C
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T