Information for 9-TCAATCACCAGCAGGG (Motif 11)

C A G T A T G C G T C A C T G A A G C T T G A C G T C A T A G C G T A C C G T A A T C G T A G C T C G A C A T G T A C G T A C G
Reverse Opposite:
A T G C A T G C G T A C A G C T A T C G A T G C G C A T C A T G A T C G A C G T A C T G T C G A G A C T C A G T T A C G G T C A
p-value:1e-9
log p-value:-2.268e+01
Information Content per bp:1.477
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets28.6 +/- 14.3bp
Average Position of motif in Background60.0 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.69
Offset:6
Orientation:forward strand
Alignment:TCAATCACCAGCAGGG--
------CACAGCAGGGGG
 C A G T A T G C G T C A C T G A A G C T T G A C G T C A T A G C G T A C C G T A A T C G T A G C T C G A C A T G T A C G T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:TCAATCACCAGCAGGG----
-----DCHCAGCAGGRGGCC
 C A G T A T G C G T C A C T G A A G C T T G A C G T C A T A G C G T A C C G T A A T C G T A G C T C G A C A T G T A C G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TCAATCACCAGCAGGG
-----DCTCAGCAGG-
 C A G T A T G C G T C A C T G A A G C T T G A C G T C A T A G C G T A C C G T A A T C G T A G C T C G A C A T G T A C G T A C G
A C G T A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCAATCACCAGCAGGG--
---CCACACAGCAGGAGA
 C A G T A T G C G T C A C T G A A G C T T G A C G T C A T A G C G T A C C G T A A T C G T A G C T C G A C A T G T A C G T A C G A C G T A C G T
A C G T A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TCAATCACCAGCAGGG
------ANCAGCTG--
 C A G T A T G C G T C A C T G A A G C T T G A C G T C A T A G C G T A C C G T A A T C G T A G C T C G A C A T G T A C G T A C G
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TCAATCACCAGCAGGG
-----NAACAGCTGG-
 C A G T A T G C G T C A C T G A A G C T T G A C G T C A T A G C G T A C C G T A A T C G T A G C T C G A C A T G T A C G T A C G
A C G T A C G T A C G T A C G T A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TCAATCACCAGCAGGG
-----CAGCAGCTGN-
 C A G T A T G C G T C A C T G A A G C T T G A C G T C A T A G C G T A C C G T A A T C G T A G C T C G A C A T G T A C G T A C G
A C G T A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TCAATCACCAGCAGGG--
---CCACACAGCAGGAGA
 C A G T A T G C G T C A C T G A A G C T T G A C G T C A T A G C G T A C C G T A A T C G T A G C T C G A C A T G T A C G T A C G A C G T A C G T
A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:TCAATCACCAGCAGGG----------
------GCCASCAGGGGGCGCYVNNG
 C A G T A T G C G T C A C T G A A G C T T G A C G T C A T A G C G T A C C G T A A T C G T A G C T C G A C A T G T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TCAATCACCAGCAGGG-------
----TGGCCACCAGGGGGCGCTA
 C A G T A T G C G T C A C T G A A G C T T G A C G T C A T A G C G T A C C G T A A T C G T A G C T C G A C A T G T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A