Information for 4-TTTGGTCACTGAMACC (Motif 5)

A G C T G A C T C G A T C T A G A C T G C A G T A G T C C G T A A G T C C G A T A C T G C G T A G T C A C G T A A G T C G T A C
Reverse Opposite:
A C T G A C T G A C G T A C G T A C G T A G T C C G T A A C T G C G A T A C T G G C T A G T A C A G T C C G T A C T G A T C G A
p-value:1e-13
log p-value:-3.121e+01
Information Content per bp:1.782
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 23.4bp
Average Position of motif in Background26.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.71
Offset:7
Orientation:forward strand
Alignment:TTTGGTCACTGAMACC-
-------ACTGAAACCA
 A G C T G A C T C G A T C T A G A C T G C A G T A G T C C G T A A G T C C G A T A C T G C G T A G T C A C G T A A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

PH0164.1_Six4/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TTTGGTCACTGAMACC-----
----ATAAATGACACCTATCA
 A G C T G A C T C G A T C T A G A C T G C A G T A G T C C G T A A G T C C G A T A C T G C G T A G T C A C G T A A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTTGGTCACTGAMACC
-NAGGTCANTGACCT-
 A G C T G A C T C G A T C T A G A C T G C A G T A G T C C G T A A G T C C G A T A C T G C G T A G T C A C G T A A G T C G T A C
A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTTGGTCACTGAMACC
--RGGGCACTAACY--
 A G C T G A C T C G A T C T A G A C T G C A G T A G T C C G T A A G T C C G A T A C T G C G T A G T C A C G T A A G T C G T A C
A C G T A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TTTGGTCACTGAMACC
----GAAACTGAAACT
 A G C T G A C T C G A T C T A G A C T G C A G T A G T C C G T A A G T C C G A T A C T G C G T A G T C A C G T A A G T C G T A C
A C G T A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TTTGGTCACTGAMACC
------VGCTGWCAVB
 A G C T G A C T C G A T C T A G A C T G C A G T A G T C C G T A A G T C C G A T A C T G C G T A G T C A C G T A A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:TTTGGTCACTGAMACC-
---------TGACACCT
 A G C T G A C T C G A T C T A G A C T G C A G T A G T C C G T A A G T C C G A T A C T G C G T A G T C A C G T A A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

PPARG/MA0066.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTTGGTCACTGAMACC----
GTAGGTCACGGTGACCTACT
 A G C T G A C T C G A T C T A G A C T G C A G T A G T C C G T A A G T C C G A T A C T G C G T A G T C A C G T A A G T C G T A C A C G T A C G T A C G T A C G T
A T C G C G A T C T G A A T C G C A T G A C G T T A G C G C T A G T A C A T C G C A T G C A G T T A C G G T C A G T A C A G T C G A C T G T C A A T G C C G A T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TTTGGTCACTGAMACC--
---GGAAANTGAAACTNA
 A G C T G A C T C G A T C T A G A C T G C A G T A G T C C G T A A G T C C G A T A C T G C G T A G T C A C G T A A G T C G T A C A C G T A C G T
A C G T A C G T A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.56
Offset:8
Orientation:forward strand
Alignment:TTTGGTCACTGAMACC
--------TTGACAG-
 A G C T G A C T C G A T C T A G A C T G C A G T A G T C C G T A A G T C C G A T A C T G C G T A G T C A C G T A A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T