Information for 10-GGGCAATAAGCAG (Motif 14)

A C T G A C T G A C T G A G T C C G T A C G T A C A G T C G T A C T G A A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A G C T A C G T G C T A A C G T A C G T A C T G A G T C A G T C A G T C
p-value:1e-7
log p-value:-1.684e+01
Information Content per bp:1.928
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets73.5 +/- 4.8bp
Average Position of motif in Background41.2 +/- 40.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAATAAGCAG
TNNGGGCAG-------
 A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A C G T A C A G T C G T A C T G A A C T G A G T C C G T A A C T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGGCAATAAGCAG
TAGGGCAAAGGTCA-
 A C G T A C G T A C T G A C T G A C T G A G T C C G T A C G T A C A G T C G T A C T G A A C T G A G T C C G T A A C T G
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAATAAGCAG
NGTGGGCAT-------
 A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A C G T A C A G T C G T A C T G A A C T G A G T C C G T A A C T G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGGCAATAAGCAG
GTAGGGCAAAGGTCA-
 A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A C G T A C A G T C G T A C T G A A C T G A G T C C G T A A C T G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGGCAATAAGCAG
TGGGGCAAAGGTCA-
 A C G T A C G T A C T G A C T G A C T G A G T C C G T A C G T A C A G T C G T A C T G A A C T G A G T C C G T A A C T G
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGGCAATAAGCAG--
TGACANARRCCAGRC
 A C T G A C T G A C T G A G T C C G T A C G T A C A G T C G T A C T G A A C T G A G T C C G T A A C T G A C G T A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------GGGCAATAAGCAG
NNNNTTGGGCACNNCN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A C G T A C A G T C G T A C T G A A C T G A G T C C G T A A C T G
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GGGCAATAAGCAG---
TGGACCAATCAGCACTCT
 A C G T A C G T A C T G A C T G A C T G A G T C C G T A C G T A C A G T C G T A C T G A A C T G A G T C C G T A A C T G A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

NFY(CCAAT)/Promoter/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GGGCAATAAGCAG
AGCCAATCGG---
 A C T G A C T G A C T G A G T C C G T A C G T A C A G T C G T A C T G A A C T G A G T C C G T A A C T G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----GGGCAATAAGCAG
WDNCTGGGCA--------
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A C G T A C A G T C G T A C T G A A C T G A G T C C G T A A C T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T