Information for 9-CCTGTTGACATGG (Motif 10)

A G T C G T A C A C G T A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C G T A C C G T A A C G T A C T G C G A T A G T C C G T A C G T A A G T C C G T A A C T G C T A G
p-value:1e-9
log p-value:-2.127e+01
Information Content per bp:1.943
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif10.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.1 +/- 18.9bp
Average Position of motif in Background51.0 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CCTGTTGACATGG
SCHTGTTTACAT--
 A C G T A G T C G T A C A C G T A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C T G A C T G
T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CCTGTTGACATGG---
--NGTTGCCATGGCAA
 A G T C G T A C A C G T A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Rfx1/MA0509.1/Jaspar

Match Rank:3
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CCTGTTGACATGG----
---GTTGCCATGGNAAC
 A G T C G T A C A C G T A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CCTGTTGACATGG---
--GGTTGCCATGGCAA
 A G T C G T A C A C G T A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCTGTTGACATGG
GGTGYTGACAGS-
 A G T C G T A C A C G T A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C T G A C T G
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CCTGTTGACATGG
TCCTGTTTACA---
 A C G T A G T C G T A C A C G T A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C T G A C T G
C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A A C G T A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CCTGTTGACATGG-
BSNTGTTTACWYWGN
 A C G T A G T C G T A C A C G T A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C T G A C T G A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCTGTTGACATGG
CNTGTTTACATA-
 A G T C G T A C A C G T A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C T G A C T G
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CCTGTTGACATGG----
-CGGTTGCCATGGCAAC
 A G T C G T A C A C G T A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C

Foxa2/MA0047.2/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCTGTTGACATGG-
--TGTTTACTTAGG
 A G T C G T A C A C G T A C T G A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C T G A C T G A C G T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G