Information for 12-CTASTTTAATAAA (Motif 9)

A G T C A C G T C T G A T A C G A G C T A C G T C G A T C G T A T C G A G A C T G T C A C T G A C G T A
Reverse Opposite:
G C A T A G C T A C G T C G T A A C G T C G A T C G T A G T C A C T G A A T G C G A C T T C G A C T A G
p-value:1e-13
log p-value:-3.185e+01
Information Content per bp:1.712
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets52.2 +/- 30.5bp
Average Position of motif in Background77.6 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0001.1_Arid3a_1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTASTTTAATAAA----
NNNTTTTAATTAANNNN
 A G T C A C G T C T G A T A C G A G C T A C G T C G A T C G T A T C G A G A C T G T C A C T G A C G T A A C G T A C G T A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CTASTTTAATAAA
----TTTAAT---
 A G T C A C G T C T G A T A C G A G C T A C G T C G A T C G T A T C G A G A C T G T C A C T G A C G T A
A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTASTTTAATAAA---
--TCTTTANTAATANN
 A G T C A C G T C T G A T A C G A G C T A C G T C G A T C G T A T C G A G A C T G T C A C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

Arid3b/MA0601.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTASTTTAATAAA
--ATATTAATTAA
 A G T C A C G T C T G A T A C G A G C T A C G T C G A T C G T A T C G A G A C T G T C A C T G A C G T A
A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

PH0159.1_Rhox6/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTASTTTAATAAA-----
-TGCCTTAATTAATGCTC
 A G T C A C G T C T G A T A C G A G C T A C G T C G A T C G T A T C G A G A C T G T C A C T G A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T C A G G T A C T G A C G A C T G A C T G C T A T C G A A C G T C G A T C G T A C T G A A G C T A C T G A T G C C G A T G A T C

PH0075.1_Hoxd10/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTASTTTAATAAA------
--AATGCAATAAAATTTAT
 A G T C A C G T C T G A T A C G A G C T A C G T C G A T C G T A T C G A G A C T G T C A C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PROP1/MA0715.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTASTTTAATAAA
-TAATTTAATTA-
 A G T C A C G T C T G A T A C G A G C T A C G T C G A T C G T A T C G A G A C T G T C A C T G A C G T A
A C G T G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A A C G T

PH0011.1_Alx1_2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTASTTTAATAAA-----
-CGCATTAATTAATTGGC
 A G T C A C G T C T G A T A C G A G C T A C G T C G A T C G T A T C G A G A C T G T C A C T G A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A G T C T C A G G T A C C T G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A A G C T A G C T C T A G C T A G T G A C

DUXA/MA0884.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTASTTTAATAAA
CTAATTTAATCAA
 A G T C A C G T C T G A T A C G A G C T A C G T C G A T C G T A T C G A G A C T G T C A C T G A C G T A
G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A

PH0093.1_Lhx3/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTASTTTAATAAA----
NNTATTTAATTAATTNN
 A G T C A C G T C T G A T A C G A G C T A C G T C G A T C G T A T C G A G A C T G T C A C T G A C G T A A C G T A C G T A C G T A C G T
T G C A C A G T C A G T G C T A G C A T G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A A G C T C A G T G C A T A T G C