Information for 15-GATGCATCAG (Motif 21)

A C T G G T C A A C G T A C T G A G T C C G T A A C G T A G T C C G T A A T C G
Reverse Opposite:
A T G C C G A T A C T G G T C A A C G T A C T G G T A C C G T A C A G T A G T C
p-value:1e-10
log p-value:-2.307e+01
Information Content per bp:1.852
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.2 +/- 26.1bp
Average Position of motif in Background46.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GATGCATCAG
ATTGCATCAK
 A C T G G T C A A C G T A C T G A G T C C G T A A C G T A G T C C G T A A T C G
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GATGCATCAG
ATTGCATCAT
 A C T G G T C A A C G T A C T G A G T C C G T A A C G T A G T C C G T A A T C G
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GATGCATCAG-
-TTGCAACATN
 A C T G G T C A A C G T A C T G A G T C C G T A A C G T A G T C C G T A A T C G A C G T
A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

ATF4/MA0833.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GATGCATCAG--
TATTGCATCATCC
 A C G T A C T G G T C A A C G T A C T G A G T C C G T A A C G T A G T C C G T A A T C G A C G T A C G T
A C G T T C G A C G A T C A G T C T A G G T A C T C G A C G A T G A T C G T C A A C G T G T A C G A T C

DMRT3/MA0610.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GATGCATCAG
NTTGATACATT--
 A C G T A C G T A C G T A C T G G T C A A C G T A C T G A G T C C G T A A C G T A G T C C G T A A T C G
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GATGCATCAG--
----CAGCTGNT
 A C T G G T C A A C G T A C T G A G T C C G T A A C G T A G T C C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GATGCATCAG----
--NVCAGCTGBBNN
 A C T G G T C A A C G T A C T G A G T C C G T A A C G T A G T C C G T A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GATGCATCAG-
-ATGMATATDC
 A C T G G T C A A C G T A C T G A G T C C G T A A C G T A G T C C G T A A T C G A C G T
A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GATGCATCAG
GYCATCMATCAT
 A C G T A C G T A C T G G T C A A C G T A C T G A G T C C G T A A C G T A G T C C G T A A T C G
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GATGCATCAG
AGGAAACAGCTG
 A C G T A C G T A C T G G T C A A C G T A C T G A G T C C G T A A C G T A G T C C G T A A T C G
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G