Information for 19-GACAAAGGGGATT (Motif 18)

T A C G C G T A G T A C C T G A G C T A C T G A C T A G A C T G A C T G C T A G G T C A A C G T A C G T
Reverse Opposite:
G T C A C G T A A C G T A G T C G T A C G T A C A G T C A G C T C G A T A G C T A C T G A C G T A T G C
p-value:1e-11
log p-value:-2.536e+01
Information Content per bp:1.763
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets46.3 +/- 25.3bp
Average Position of motif in Background36.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GACAAAGGGGATT
AAAACAAAGG-----
 A C G T A C G T T A C G C G T A G T A C C T G A G C T A C T G A C T A G A C T G A C T G C T A G G T C A A C G T A C G T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GACAAAGGGGATT
AACAAAGG-----
 T A C G C G T A G T A C C T G A G C T A C T G A C T A G A C T G A C T G C T A G G T C A A C G T A C G T
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GACAAAGGGGATT
RACAAWGG-----
 T A C G C G T A G T A C C T G A G C T A C T G A C T A G A C T G A C T G C T A G G T C A A C G T A C G T
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GACAAAGGGGATT
-ACAAAG------
 T A C G C G T A G T A C C T G A G C T A C T G A C T A G A C T G A C T G C T A G G T C A A C G T A C G T
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GACAAAGGGGATT
VRRACAAWGG-----
 A C G T A C G T T A C G C G T A G T A C C T G A G C T A C T G A C T A G A C T G A C T G C T A G G T C A A C G T A C G T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GACAAAGGGGATT--
----AAGAGGATTAG
 T A C G C G T A G T A C C T G A G C T A C T G A C T A G A C T G A C T G C T A G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GACAAAGGGGATT
GGAACAAAGR-----
 A C G T A C G T T A C G C G T A G T A C C T G A G C T A C T G A C T A G A C T G A C T G C T A G G T C A A C G T A C G T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GACAAAGGGGATT
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T T A C G C G T A G T A C C T G A G C T A C T G A C T A G A C T G A C T G C T A G G T C A A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GACAAAGGGGATT
-ACAAAGGNBCCT
 T A C G C G T A G T A C C T G A G C T A C T G A C T A G A C T G A C T G C T A G G T C A A C G T A C G T
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GACAAAGGGGATT
AAAACAATGG-----
 A C G T A C G T T A C G C G T A G T A C C T G A G C T A C T G A C T A G A C T G A C T G C T A G G T C A A C G T A C G T
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T A C G T A C G T