Information for 16-TGTKTTGGACTAG (Motif 12)

A C G T A C T G C A G T A C G T A C G T C G A T A C T G C T A G G T C A G A T C C G A T C G T A A C T G
Reverse Opposite:
G T A C C G A T C G T A C T A G A C G T A G T C G T A C C G T A C G T A T G C A G T C A A G T C G T C A
p-value:1e-13
log p-value:-3.148e+01
Information Content per bp:1.730
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.6 +/- 23.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TGTKTTGGACTAG
NNCTTTGTTTTGNTNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C A G T A C G T A C G T C G A T A C T G C T A G G T C A G A T C C G A T C G T A A C T G
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TGTKTTGGACTAG-
------GGATTAGC
 A C G T A C T G C A G T A C G T A C G T C G A T A C T G C T A G G T C A G A T C C G A T C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

PB0114.1_Egr1_2/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TGTKTTGGACTAG
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A C G T A C T G C A G T A C G T A C G T C G A T A C T G C T A G G T C A G A T C C G A T C G T A A C T G
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGTKTTGGACTAG----
-NNATTGGACTTTNGNN
 A C G T A C T G C A G T A C G T A C G T C G A T A C T G C T A G G T C A G A T C C G A T C G T A A C T G A C G T A C G T A C G T A C G T
A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PB0200.1_Zfp187_2/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGTKTTGGACTAG-----
--NNAGGGACAAGGGCNC
 A C G T A C T G C A G T A C G T A C G T C G A T A C T G C T A G G T C A G A T C C G A T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

PB0123.1_Foxl1_2/Jaspar

Match Rank:6
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TGTKTTGGACTAG
NNTTTTGTTTTGATNT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C A G T A C G T A C G T C G A T A C T G C T A G G T C A G A T C C G A T C G T A A C T G
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TGTKTTGGACTAG
-----AGGCCTAG
 A C G T A C T G C A G T A C G T A C G T C G A T A C T G C T A G G T C A G A T C C G A T C G T A A C T G
A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.51
Offset:5
Orientation:forward strand
Alignment:TGTKTTGGACTAG
-----RGGATTAR
 A C G T A C T G C A G T A C G T A C G T C G A T A C T G C T A G G T C A G A T C C G A T C G T A A C T G
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TGTKTTGGACTAG-
-----GGGATTANN
 A C G T A C T G C A G T A C G T A C G T C G A T A C T G C T A G G T C A G A T C C G A T C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TGTKTTGGACTAG
-----GGGATTAA
 A C G T A C T G C A G T A C G T A C G T C G A T A C T G C T A G G T C A G A T C C G A T C G T A A C T G
A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A