Information for 13-TTTAAAATTAAAC (Motif 10)

G A C T A C G T C G A T C T G A C G T A C G T A C G T A C G A T A C G T C G T A C G T A C G T A A G T C
Reverse Opposite:
C T A G A C G T G A C T A C G T T C G A C G T A C G A T G C A T C G A T A G C T C G T A G T C A C G T A
p-value:1e-13
log p-value:-3.148e+01
Information Content per bp:1.789
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.0 +/- 25.9bp
Average Position of motif in Background43.2 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TTTAAAATTAAAC-
-TTAATGTTTAACC
 G A C T A C G T C G A T C T G A C G T A C G T A C G T A C G A T A C G T C G T A C G T A C G T A A G T C A C G T
A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

PB0129.1_Glis2_2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTTAAAATTAAAC-
AATATTAATAAAGA
 G A C T A C G T C G A T C T G A C G T A C G T A C G T A C G A T A C G T C G T A C G T A C G T A A G T C A C G T
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.68
Offset:6
Orientation:forward strand
Alignment:TTTAAAATTAAAC
------ATTAAA-
 G A C T A C G T C G A T C T G A C G T A C G T A C G T A C G A T A C G T C G T A C G T A C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTTAAAATTAAAC--
NNNTTTTAATTAANNNN
 A C G T A C G T G A C T A C G T C G A T C T G A C G T A C G T A C G T A C G A T A C G T C G T A C G T A C G T A A G T C A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

PB0198.1_Zfp128_2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTTAAAATTAAAC-
NNTATANATATACN
 G A C T A C G T C G A T C T G A C G T A C G T A C G T A C G A T A C G T C G T A C G T A C G T A A G T C A C G T
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTTAAAATTAAAC
GTTAATNATTAA--
 A C G T G A C T A C G T C G A T C T G A C G T A C G T A C G T A C G A T A C G T C G T A C G T A C G T A A G T C
C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TTTAAAATTAAAC-
-----AAATAAACA
 G A C T A C G T C G A T C T G A C G T A C G T A C G T A C G A T A C G T C G T A C G T A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TTTAAAATTAAAC-
----AAAGTAAACA
 G A C T A C G T C G A T C T G A C G T A C G T A C G T A C G A T A C G T C G T A C G T A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TTTAAAATTAAAC-
----AAAGTAAACA
 G A C T A C G T C G A T C T G A C G T A C G T A C G T A C G A T A C G T C G T A C G T A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

PH0100.1_Lmx1a/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTTAAAATTAAAC--
NNTTTTTAATTAATTCG
 A C G T A C G T G A C T A C G T C G A T C T G A C G T A C G T A C G T A C G A T A C G T C G T A C G T A C G T A A G T C A C G T A C G T
C T A G C T A G C G A T C G A T G C A T G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G A T C G A T A T G C A T C G