Information for 10-AATGYACSTSAMC (Motif 6)

C G T A C G T A A C G T A C T G A G C T C G T A A T G C A T G C G A C T A T G C C G T A G T C A A G T C
Reverse Opposite:
A C T G A C G T A C G T A T C G C G T A A T C G A T C G A C G T C T G A A G T C C G T A A C G T A C G T
p-value:1e-13
log p-value:-3.099e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.7 +/- 20.8bp
Average Position of motif in Background15.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AATGYACSTSAMC
-----ACGTCA--
 C G T A C G T A A C G T A C T G A G C T C G T A A T G C A T G C G A C T A T G C C G T A G T C A A G T C
A C G T A C G T A C G T A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AATGYACSTSAMC
----TACGTCAT-
 C G T A C G T A A C G T A C T G A G C T C G T A A T G C A T G C G A C T A T G C C G T A G T C A A G T C
A C G T A C G T A C G T A C G T A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AATGYACSTSAMC-
--TGACCTTGACCT
 C G T A C G T A A C G T A C T G A G C T C G T A A T G C A T G C G A C T A T G C C G T A G T C A A G T C A C G T
A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AATGYACSTSAMC-
--TGACCTTGACCT
 C G T A C G T A A C G T A C T G A G C T C G T A A T G C A T G C G A C T A T G C C G T A G T C A A G T C A C G T
A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

Atf3/MA0605.1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AATGYACSTSAMC
-----ACGTCATC
 C G T A C G T A A C G T A C T G A G C T C G T A A T G C A T G C G A C T A T G C C G T A G T C A A G T C
A C G T A C G T A C G T A C G T A C G T C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C

Id2/MA0617.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AATGYACSTSAMC
---GCACGTGA--
 C G T A C G T A A C G T A C T G A G C T C G T A A T G C A T G C G A C T A T G C C G T A G T C A A G T C
A C G T A C G T A C G T T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AATGYACSTSAMC
---NCACGTGACN
 C G T A C G T A A C G T A C T G A G C T C G T A A T G C A T G C G A C T A T G C C G T A G T C A A G T C
A C G T A C G T A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C

RORA(var.2)/MA0072.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AATGYACSTSAMC
TATAAGTAGGTCAA-
 A C G T A C G T C G T A C G T A A C G T A C T G A G C T C G T A A T G C A T G C G A C T A T G C C G T A G T C A A G T C
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AATGYACSTSAMC
SSAATCCACANN---
 A C G T A C G T C G T A C G T A A C G T A C T G A G C T C G T A A T G C A T G C G A C T A T G C C G T A G T C A A G T C
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T A C G T

Crem/MA0609.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AATGYACSTSAMC
---TTACGTCATN
 C G T A C G T A A C G T A C T G A G C T C G T A A T G C A T G C G A C T A T G C C G T A G T C A A G T C
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A C G T G T A C C G T A A G C T G T C A