Information for 6-TCGGAGAATT (Motif 6)

G A C T A T G C C T A G C T A G T G C A T C A G G T C A G C T A C A G T A C G T
Reverse Opposite:
T G C A G T C A C G A T C A G T A G T C A C G T G A T C G A T C T A C G C T G A
p-value:1e-12
log p-value:-2.768e+01
Information Content per bp:1.657
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif4.93%
Number of Background Sequences with motif640.4
Percentage of Background Sequences with motif1.34%
Average Position of motif in Targets45.9 +/- 28.2bp
Average Position of motif in Background49.4 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCGGAGAATT
TTTCTNAGAAAN
 A C G T A C G T G A C T A T G C C T A G C T A G T G C A T C A G G T C A G C T A C A G T A C G T
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TCGGAGAATT--
GNNACCGAGAATNNN
 A C G T A C G T A C G T G A C T A T G C C T A G C T A G T G C A T C A G G T C A G C T A C A G T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TCGGAGAATT--
TTGACCGAGAATTCC
 A C G T A C G T A C G T G A C T A T G C C T A G C T A G T G C A T C A G G T C A G C T A C A G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PH0009.1_Bsx/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCGGAGAATT-----
NTNAGNTAATTACCTN
 A C G T G A C T A T G C C T A G C T A G T G C A T C A G G T C A G C T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C G A C T A T C G T C G A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A G T A C G A T C A C G T A C T G

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCGGAGAATT
ATTTCCAAGAA--
 A C G T A C G T A C G T G A C T A T G C C T A G C T A G T G C A T C A G G T C A G C T A C A G T A C G T
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TCGGAGAATT--
TCTTTCGAGGAATTTG
 A C G T A C G T A C G T A C G T G A C T A T G C C T A G C T A G T G C A T C A G G T C A G C T A C A G T A C G T A C G T A C G T
C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCGGAGAATT--
NNCNNAACAATTNT
 A C G T A C G T G A C T A T G C C T A G C T A G T G C A T C A G G T C A G C T A C A G T A C G T A C G T A C G T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCGGAGAATT-----
TNCNNAACAATTTTTNC
 A C G T A C G T G A C T A T G C C T A G C T A G T G C A T C A G G T C A G C T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0173.1_Sox21_2/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TCGGAGAATT----
NNNNNGAACAATTGANN
 A C G T A C G T A C G T G A C T A T G C C T A G C T A G T G C A T C A G G T C A G C T A C A G T A C G T A C G T A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCGGAGAATT--
--NTGGAATGTN
 G A C T A T G C C T A G C T A G T G C A T C A G G T C A G C T A C A G T A C G T A C G T A C G T
A C G T A C G T C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G