Information for 5-GGCAGCAGAG (Motif 3)

A C T G T C A G A G T C G T C A A C T G A G T C G T C A C A T G G T C A T A C G
Reverse Opposite:
A T G C C A G T G T A C A C G T T C A G A G T C C A G T A C T G A G T C G T A C
p-value:1e-23
log p-value:-5.448e+01
Information Content per bp:1.732
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif5.16%
Number of Background Sequences with motif334.1
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets41.6 +/- 24.1bp
Average Position of motif in Background52.8 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGCAGCAGAG
TGAGTCAGCA---
 A C G T A C G T A C G T A C T G T C A G A G T C G T C A A C T G A G T C G T C A C A T G G T C A T A C G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGCAGAG
TNNGGGCAG-----
 A C G T A C G T A C G T A C G T A C T G T C A G A G T C G T C A A C T G A G T C G T C A C A T G G T C A T A C G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGCAGCAGAG-
GTCAGCANNTN
 A C T G T C A G A G T C G T C A A C T G A G T C G T C A C A T G G T C A T A C G A C G T
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

PB0041.1_Mafb_1/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GGCAGCAGAG--
NCTANGTCAGCAAATTT
 A C G T A C G T A C G T A C G T A C G T A C T G T C A G A G T C G T C A A C T G A G T C G T C A C A T G G T C A T A C G A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGCAGCAGAG
ANCAGCTG--
 A C T G T C A G A G T C G T C A A C T G A G T C G T C A C A T G G T C A T A C G
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGCAGCAGAG
BTKGGCGGGAAA-
 A C G T A C G T A C G T A C T G T C A G A G T C G T C A A C T G A G T C G T C A C A T G G T C A T A C G
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T

E2F4/MA0470.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGCAGCAGAG
GGGCGGGAAGG
 A C G T A C T G T C A G A G T C G T C A A C T G A G T C G T C A C A T G G T C A T A C G
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGCAGCAGAG
CACAGN----
 A C T G T C A G A G T C G T C A A C T G A G T C G T C A C A T G G T C A T A C G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGCAGCAGAG-
NGTCAGCANTTT
 A C G T A C T G T C A G A G T C G T C A A C T G A G T C G T C A C A T G G T C A T A C G A C G T
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGCAGCAGAG-
CTGAGTCAGCAATTT
 A C G T A C G T A C G T A C G T A C T G T C A G A G T C G T C A A C T G A G T C G T C A C A T G G T C A T A C G A C G T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T