p-value: | 1e-8 |
log p-value: | -2.021e+01 |
Information Content per bp: | 1.652 |
Number of Target Sequences with motif | 59.0 |
Percentage of Target Sequences with motif | 6.77% |
Number of Background Sequences with motif | 1349.1 |
Percentage of Background Sequences with motif | 2.83% |
Average Position of motif in Targets | 50.3 +/- 30.2bp |
Average Position of motif in Background | 50.0 +/- 28.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Arid3a/MA0151.1/Jaspar
Match Rank: | 1 |
Score: | 0.77 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTTTAATCTT -TTTAAT--- |
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Tcf7/MA0769.1/Jaspar
Match Rank: | 2 |
Score: | 0.72 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GTTTAATCTT- CCTTTGATCTTT |
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LEF1/MA0768.1/Jaspar
Match Rank: | 3 |
Score: | 0.71 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GTTTAATCTT- AACCCTTTGATCTTT |
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OTX2/MA0712.1/Jaspar
Match Rank: | 4 |
Score: | 0.70 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GTTTAATCTT --TTAATCCT |
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GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer
Match Rank: | 5 |
Score: | 0.67 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GTTTAATCTT --YTAATCCY |
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TCF7L2/MA0523.1/Jaspar
Match Rank: | 6 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GTTTAATCTT- TNCCTTTGATCTTN |
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Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer
Match Rank: | 7 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GTTTAATCTT- -NYTAATCCYB |
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Pitx1/MA0682.1/Jaspar
Match Rank: | 8 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GTTTAATCTT --TTAATCCC |
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PB0040.1_Lef1_1/Jaspar
Match Rank: | 9 |
Score: | 0.64 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GTTTAATCTT-- AATCCCTTTGATCTATC |
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Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer
Match Rank: | 10 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GTTTAATCTT----- --TTAATGTTTAACC |
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