Information for 5-GCAAAAAACATGG (Motif 2)

C A T G A G T C G T C A C G T A C G T A C G T A G T C A C T G A T G A C C G T A G C A T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C T G G A T C
p-value:1e-14
log p-value:-3.239e+01
Information Content per bp:1.823
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.6 +/- 14.3bp
Average Position of motif in Background59.5 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0093.1_Zfp105_1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCAAAAAACATGG-
AACAAACAACAAGAG
 A C G T C A T G A G T C G T C A C G T A C G T A C G T A G T C A C T G A T G A C C G T A G C A T A C T G A C T G A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCAAAAAACATGG--
GTTAAAAAAAAAAATTA
 A C G T A C G T C A T G A G T C G T C A C G T A C G T A C G T A G T C A C T G A T G A C C G T A G C A T A C T G A C T G A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCAAAAAACATGG
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T C A T G A G T C G T C A C G T A C G T A C G T A G T C A C T G A T G A C C G T A G C A T A C T G A C T G
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCAAAAAACATGG
TACTGGAAAAAAAA---
 A C G T A C G T A C G T A C G T C A T G A G T C G T C A C G T A C G T A C G T A G T C A C T G A T G A C C G T A G C A T A C T G A C T G
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAAAACATGG
CAATTGCAAAAATAT---
 A C G T A C G T A C G T A C G T A C G T C A T G A G T C G T C A C G T A C G T A C G T A G T C A C T G A T G A C C G T A G C A T A C T G A C T G
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCAAAAAACATGG--
GTTCAAAAAAAAAATTC
 A C G T A C G T C A T G A G T C G T C A C G T A C G T A C G T A G T C A C T G A T G A C C G T A G C A T A C T G A C T G A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

CDX2/MA0465.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCAAAAAACATGG
AAGCCATAAAA----
 A C G T A C G T C A T G A G T C G T C A C G T A C G T A C G T A G T C A C T G A T G A C C G T A G C A T A C T G A C T G
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GCAAAAAACATGG----
-----CAAGATGGCGGC
 C A T G A G T C G T C A C G T A C G T A C G T A G T C A C T G A T G A C C G T A G C A T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

PB0186.1_Tcf3_2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCAAAAAACATGG
AGCCGAAAAAAAAAT-
 A C G T A C G T A C G T C A T G A G T C G T C A C G T A C G T A C G T A G T C A C T G A T G A C C G T A G C A T A C T G A C T G
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCAAAAAACATGG
GCAATAAAAA---
 C A T G A G T C G T C A C G T A C G T A C G T A G T C A C T G A T G A C C G T A G C A T A C T G A C T G
T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A A C G T A C G T A C G T