Information for 4-GGTGTCAGTA (Motif 2)

C T A G A T C G A G C T A C T G C G A T T G A C C G T A A T C G G A C T T C G A
Reverse Opposite:
A G C T C T G A T A G C G C A T A C T G G C T A T G A C T C G A T A G C G A T C
p-value:1e-18
log p-value:-4.301e+01
Information Content per bp:1.654
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif6.50%
Number of Background Sequences with motif684.6
Percentage of Background Sequences with motif1.42%
Average Position of motif in Targets51.0 +/- 26.1bp
Average Position of motif in Background50.9 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGTCAGTA--
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T A C G T A C G T C T A G A T C G A G C T A C T G C G A T T G A C C G T A A T C G G A C T T C G A A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GGTGTCAGTA
AGGTGTCA---
 A C G T C T A G A T C G A G C T A C T G C G A T T G A C C G T A A T C G G A C T T C G A
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGTGTCAGTA
VBTGWCAGCB
 C T A G A T C G A G C T A C T G C G A T T G A C C G T A A T C G G A C T T C G A
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGTGTCAGTA
TGGTTTCAGT-
 A C G T C T A G A T C G A G C T A C T G C G A T T G A C C G T A A T C G G A C T T C G A
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GGTGTCAGTA
-NTGTCAN--
 C T A G A T C G A G C T A C T G C G A T T G A C C G T A A T C G G A C T T C G A
A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGTGTCAGTA
AGGTGTGA---
 A C G T C T A G A T C G A G C T A C T G C G A T T G A C C G T A A T C G G A C T T C G A
C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGTGTCAGTA
RHTGWCAR--
 C T A G A T C G A G C T A C T G C G A T T G A C C G T A A T C G G A C T T C G A
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGTGTCAGTA
AGGTGTGA---
 A C G T C T A G A T C G A G C T A C T G C G A T T G A C C G T A A T C G G A C T T C G A
C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGTGTCAGTA
--TGTCANYT
 C T A G A T C G A G C T A C T G C G A T T G A C C G T A A T C G G A C T T C G A
A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGTGTCAGTA
AGGTGTGA---
 A C G T C T A G A T C G A G C T A C T G C G A T T G A C C G T A A T C G G A C T T C G A
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T