Information for 10-GCACCTGCAG (Motif 13)

A C T G G T A C T G C A A G T C A G T C A G C T A C T G G T A C T G C A A C T G
Reverse Opposite:
A G T C A C G T A C T G G T A C C T G A A C T G A C T G A C G T A C T G A G T C
p-value:1e-7
log p-value:-1.658e+01
Information Content per bp:1.849
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif242.8
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets50.4 +/- 28.5bp
Average Position of motif in Background52.0 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--GCACCTGCAG
SNGCACCTGCHS
 A C G T A C G T A C T G G T A C T G C A A G T C A G T C A G C T A C T G G T A C T G C A A C T G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:2
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----GCACCTGCAG--
NNTNCGCACCTGTNGAN
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C T G C A A G T C A G T C A G C T A C T G G T A C T G C A A C T G A C G T A C G T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

TCF4/MA0830.1/Jaspar

Match Rank:3
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GCACCTGCAG
CGCACCTGCT-
 A C G T A C T G G T A C T G C A A G T C A G T C A G C T A C T G G T A C T G C A A C T G
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-GCACCTGCAG
NNCACCTGNN-
 A C G T A C T G G T A C T G C A A G T C A G T C A G C T A C T G G T A C T G C A A C T G
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T

TCF3/MA0522.2/Jaspar

Match Rank:5
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GCACCTGCAG
AACACCTGCT-
 A C G T A C T G G T A C T G C A A G T C A G T C A G C T A C T G G T A C T G C A A C T G
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:6
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GCACCTGCAG
TACACCTGTC-
 A C G T A C T G G T A C T G C A A G T C A G T C A G C T A C T G G T A C T G C A A C T G
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GCACCTGCAG
NCACCTGTN-
 A C T G G T A C T G C A A G T C A G T C A G C T A C T G G T A C T G C A A C T G
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GCACCTGCAG
CCTCACCTG---
 A C G T A C G T A C T G G T A C T G C A A G T C A G T C A G C T A C T G G T A C T G C A A C T G
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCACCTGCAG
CGCAGCTGCG-
 A C G T A C T G G T A C T G C A A G T C A G T C A G C T A C T G G T A C T G C A A C T G
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:10
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GCACCTGCAG--
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C T G C A A G T C A G T C A G C T A C T G G T A C T G C A A C T G A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G