Information for 10-AGGGACVGACVGA (Motif 12)

C T G A A T C G A C T G A C T G C G T A A T G C T A C G A T C G C T G A A G T C T A C G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C T G A G C T A T G C A G T C A T C G A C G T A G T C A G T C A T G C A G C T
p-value:1e-8
log p-value:-1.952e+01
Information Content per bp:1.849
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.2 +/- 20.0bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGGGACVGACVGA
CCAGGAACAG-----
 A C G T A C G T C T G A A T C G A C T G A C T G C G T A A T G C T A C G A T C G C T G A A G T C T A C G A C T G C G T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGGGACVGACVGA
TGGGGCCCAC---
 C T G A A T C G A C T G A C T G C G T A A T G C T A C G A T C G C T G A A G T C T A C G A C T G C G T A
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:3
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----AGGGACVGACVGA
NNTNNGGGGCGGNGNGN
 A C G T A C G T A C G T A C G T C T G A A T C G A C T G A C T G C G T A A T G C T A C G A T C G C T G A A G T C T A C G A C T G C G T A
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGGGACVGACVGA
TGGGGAAGGGCM--
 A C G T C T G A A T C G A C T G A C T G C G T A A T G C T A C G A T C G C T G A A G T C T A C G A C T G C G T A
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----AGGGACVGACVGA
NNTNAGGGGCGGNNNN-
 A C G T A C G T A C G T A C G T C T G A A T C G A C T G A C T G C G T A A T G C T A C G A T C G C T G A A G T C T A C G A C T G C G T A
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AGGGACVGACVGA
AGGTGHCAGACA--
 A C G T C T G A A T C G A C T G A C T G C G T A A T G C T A C G A T C G C T G A A G T C T A C G A C T G C G T A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AGGGACVGACVGA
TGAGTGACAGSC---
 A C G T A C G T C T G A A T C G A C T G A C T G C G T A A T G C T A C G A T C G C T G A A G T C T A C G A C T G C G T A
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGGGACVGACVGA
AGGTGNCAGACAG-
 A C G T C T G A A T C G A C T G A C T G C G T A A T G C T A C G A T C G C T G A A G T C T A C G A C T G C G T A
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AGGGACVGACVGA
NRRGGGTCTT-----
 A C G T A C G T C T G A A T C G A C T G A C T G C G T A A T G C T A C G A T C G C T G A A G T C T A C G A C T G C G T A
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AGGGACVGACVGA
TGGGGA--------
 A C G T C T G A A T C G A C T G A C T G C G T A A T G C T A C G A T C G C T G A A G T C T A C G A C T G C G T A
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T