Information for 5-TGTCCCCTTAGCTGAG (Motif 9)

C G A T A C T G A C G T A G T C G T A C A G T C A G T C A G C T A G C T C G T A A C T G A G T C A C G T A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C G T C A C T A G A G T C C G A T C T G A C T G A A C T G A C T G A C T G A C T G C G T A A G T C C G T A
p-value:1e-8
log p-value:-1.960e+01
Information Content per bp:1.914
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.8 +/- 16.6bp
Average Position of motif in Background63.3 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGTCCCCTTAGCTGAG
--TCCCCA--------
 C G A T A C T G A C G T A G T C G T A C A G T C A G T C A G C T A G C T C G T A A C T G A G T C A C G T A C T G C G T A A C T G
A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TGTCCCCTTAGCTGAG
NNNNTTGACCCCTNNNN----
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T A G T C G T A C A G T C A G T C A G C T A G C T C G T A A C T G A G T C A C G T A C T G C G T A A C T G
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TGTCCCCTTAGCTGAG
TGTCGTGACCCCTTAAT----
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T A G T C G T A C A G T C A G T C A G C T A G C T C G T A A C T G A G T C A C G T A C T G C G T A A C T G
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T A C G T A C G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGTCCCCTTAGCTGAG
-TTCCCCCTAC-----
 C G A T A C T G A C G T A G T C G T A C A G T C A G T C A G C T A G C T C G T A A C T G A G T C A C G T A C T G C G T A A C T G
A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:5
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TGTCCCCTTAGCTGAG
NNANTTGACCCCTNNNN----
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T A G T C G T A C A G T C A G T C A G C T A G C T C G T A A C T G A G T C A C G T A C T G C G T A A C T G
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TGTCCCCTTAGCTGAG
-GTCACGCTCNCTGA-
 C G A T A C T G A C G T A G T C G T A C A G T C A G T C A G C T A G C T C G T A A C T G A G T C A C G T A C T G C G T A A C T G
A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TGTCCCCTTAGCTGAG
---BCMATTAG-----
 C G A T A C T G A C G T A G T C G T A C A G T C A G T C A G C T A G C T C G T A A C T G A G T C A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TGTCCCCTTAGCTGAG-
--TGWCCTCARNTGACC
 C G A T A C T G A C G T A G T C G T A C A G T C A G T C A G C T A G C T C G T A A C T G A G T C A C G T A C T G C G T A A C T G A C G T
A C G T A C G T G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TGTCCCCTTAGCTGAG
TGACCYCT--------
 C G A T A C T G A C G T A G T C G T A C A G T C A G T C A G C T A G C T C G T A A C T G A G T C A C G T A C T G C G T A A C T G
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:TGTCCCCTTAGCTGAG
----NCCTTATCTG--
 C G A T A C T G A C G T A G T C G T A C A G T C A G T C A G C T A G C T C G T A A C T G A G T C A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T A C G T