Information for 4-CTCTGCTGCCATC (Motif 3)

A G T C G A C T T A G C A C G T A C T G A T G C C A G T A C T G A G T C A G T C G T C A A G C T A T G C
Reverse Opposite:
A T C G T C G A C A G T C T A G T A C G G T A C G C T A A T C G A G T C C G T A A C T G C T G A T A C G
p-value:1e-15
log p-value:-3.474e+01
Information Content per bp:1.763
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.69%
Number of Background Sequences with motif122.4
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets50.7 +/- 23.8bp
Average Position of motif in Background53.4 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CTCTGCTGCCATC-
-----ATGCCAACC
 A G T C G A C T T A G C A C G T A C T G A T G C C A G T A C T G A G T C A G T C G T C A A G C T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTCTGCTGCCATC
-GGTGYTGACAGS
 A G T C G A C T T A G C A C G T A C T G A T G C C A G T A C T G A G T C A G T C G T C A A G C T A T G C
A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTCTGCTGCCATC---
----GCCGCCATCTTG
 A G T C G A C T T A G C A C G T A C T G A T G C C A G T A C T G A G T C A G T C G T C A A G C T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTCTGCTGCCATC-----
--ACTATGCCAACCTACC
 A G T C G A C T T A G C A C G T A C T G A T G C C A G T A C T G A G T C A G T C G T C A A G C T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

NRL/MA0842.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTCTGCTGCCATC
AATTTGCTGAC---
 A C G T A G T C G A C T T A G C A C G T A C T G A T G C C A G T A C T G A G T C A G T C G T C A A G C T A T G C
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTCTGCTGCCATC
--CAGCTGNT---
 A G T C G A C T T A G C A C G T A C T G A T G C C A G T A C T G A G T C A G T C G T C A A G C T A T G C
A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCTGCTGCCATC
--MTGATGCAAT-
 A G T C G A C T T A G C A C G T A C T G A T G C C A G T A C T G A G T C A G T C G T C A A G C T A T G C
A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CTCTGCTGCCATC
-----TTGCCAAG
 A G T C G A C T T A G C A C G T A C T G A T G C C A G T A C T G A G T C A G T C G T C A A G C T A T G C
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CTCTGCTGCCATC-
-----CTGCCCGCA
 A G T C G A C T T A G C A C G T A C T G A T G C C A G T A C T G A G T C A G T C G T C A A G C T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTCTGCTGCCATC
--ATGATGCAAT-
 A G T C G A C T T A G C A C G T A C T G A T G C C A G T A C T G A G T C A G T C G T C A A G C T A T G C
A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T