Information for 7-CTCATGTTGCATA (Motif 3)

A G T C A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C G T C A A C G T G T C A
Reverse Opposite:
A C G T C G T A A C G T C T A G A G T C C G T A C G T A G T A C G T C A C G A T C T A G G T C A A C T G
p-value:1e-12
log p-value:-2.979e+01
Information Content per bp:1.838
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.7 +/- 38.3bp
Average Position of motif in Background37.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT2/MA0744.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTCATGTTGCATA
CCACCTGTTGCAT-
 A C G T A G T C A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C G T C A A C G T G T C A
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CTCATGTTGCATA-
----ATTTGCATAT
 A G T C A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C G T C A A C G T G T C A A C G T
A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CTCATGTTGCATA-
----ATTTGCATAA
 A G T C A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C G T C A A C G T G T C A A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:4
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CTCATGTTGCATA--
-----VTTRCATAAY
 A G T C A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C G T C A A C G T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTCATGTTGCATA-
-TTCATTTGCATAT
 A G T C A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C G T C A A C G T G T C A A C G T
A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

POU2F1/MA0785.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CTCATGTTGCATA--
---AATTTGCATANT
 A G T C A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C G T C A A C G T G T C A A C G T A C G T
A C G T A C G T A C G T G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:7
Score:0.63
Offset:5
Orientation:forward strand
Alignment:CTCATGTTGCATA-
-----ATTGCATAA
 A G T C A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C G T C A A C G T G T C A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A

SCRT1/MA0743.1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTCATGTTGCATA
ANCCACCTGTTGCNC-
 A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C G T C A A C G T G T C A
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTCATGTTGCATA
----ATTTGCATA
 A G T C A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C G T C A A C G T G T C A
A C G T A C G T A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTCATGTTGCATA---
TNTAATTTGCATANNN
 A G T C A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C G T C A A C G T G T C A A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A